Part of scaffold_2197 (Scaffold)

For more information consult the page for scaffold_2197 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MMP11 ENSTTRG00000002047 (Bottlenosed dolphin)

Gene Details

matrix metallopeptidase 11 (stromelysin 3)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001923, Bottlenosed dolphin)

Protein Percentage 96.15%
cDNA percentage 96.46%
Ka/Ks Ratio 0.21447 (Ka = 0.0202, Ks = 0.0943)

MMP11 ENSBTAG00000006108 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008025, Cow)

Protein Percentage 91.42%
cDNA percentage 89.79%
Ka/Ks Ratio 0.08965 (Ka = 0.0419, Ks = 0.4677)

MMP11  (Minke Whale)

Gene Details

matrix metallopeptidase 11 (stromelysin 3)

External Links

Gene match (Identifier: BACU017146, Minke Whale)

Protein Percentage 99.74%
cDNA percentage 98.89%
Ka/Ks Ratio 0.02342 (Ka = 0.0011, Ks = 0.0477)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1329 bp    Location:98854..109661   Strand:+
>bmy_19805
ATGCTCCCCTGGAAGCACTCAAGACCACTTAAGGATGCCTACCGCCGCCACCCAGTGAGGAGGGGGCCGCAGCCCTGGCGTGAAGCTCCTCCTAGCAGCCCGGCACCTGCCCCGACTACCCAGGAGGCCCCTCAGCCTGCCGCCGGCCCCAGACCTCCCCGCTGCGGCGTGCCTGACCCGCCGGACGGGCCGAGCGCCCGCAACCGACAAAAGCGGTTCGTGCTGTCGGGCGGGCGCTGGGAGAAGACGGACCTCACCTACAGGATCCTCCGGTTCCCATGGCAGCTGGTGCGGGAACAGGTGCGGCAGACGGTGGCAGAGGCCCTACAGGTATGGAGTGATGTGACGCCACTCACCTTTACCGAGGTGCACGAGGGCCACGCTGACATCATAATCGACTTCACCAGGTACTGGCATGGGGACAACCTGCCGTTTGATGGACCTGGGGGCATCCTGGCCCACGCCTTCTTCCCCAAGACCCACAGAGAAGGGGATGTGGCAGCCCACGAATTTGGCCATGTGCTAGGGCTGCAGCACACGACAGCTGCTAAGGCCCTCATGTCCCCTTTCTACACCTTCCGATACCCGCTGAGCCTCAGCCCGGATGACCGCAGGGGCATCCAGCACCTCTACGGCCGGCCTCGGCTAGCCCCCACCTCTAGGCCCCCAGACCTGGGCCCCGGGGCCAGGGTGGACACCAACGAGATTGCACCTCTGGAGCCAGATGCCCCACCAGATGCCTGCCAGGTCTCCTTTGATGCAGTCGCCACCATCCGCGGCGAACTCTTCTTCTTCAAGGCAGGCTTTGTATGGCGGCTGCGCGGGGGCCGGCTGCAGCCCGGCTACCCTGCGCTGGCCTCACGCCACTGGCAGGGGCTGCCCACCTCCGTGGATGCAGCCTTCGAGGATGCCCAGGGCCACATCTGGTTCTTCCAAGGAGCTCAATACTGGGTATACGATGGTGAGAAGCCAGTCCTGGGCCCCGCGCCCCTTTCTGAGCTGGGCCTGCTGGGGTCCCTGGTCCACGCCGCCCTGGTCTGGGGCCCCGAGAAGAACAAGATCTACTTCTTCCGAGGCGGAGACTACTGGCGCTTCCACCCCAGCACCCGCCGTGTGGACAGCCCCGTGCCCCGCCGGGCCACCGACTGGCGAGGGGTGCCCTCTGAGATCGACGCTGCATTCCAGGATGCTGATGGCTATGCCTACTTCCTGCGCGGCCGCCTCTACTGGAAGTTTGACCCTGTGAAGGTGAAGGCCCTGGAGGGCTTCCCCCGCCTCGTGGGCCCCGACTTCTTTGGGTGTACCGAGCCTGCCAATACTTTCCGCTAA

Related Sequences

bmy_19805T0 Protein

Length: 443 aa      View alignments
>bmy_19805T0
MLPWKHSRPLKDAYRRHPVRRGPQPWREAPPSSPAPAPTTQEAPQPAAGPRPPRCGVPDPPDGPSARNRQKRFVLSGGRWEKTDLTYRILRFPWQLVREQVRQTVAEALQVWSDVTPLTFTEVHEGHADIIIDFTRYWHGDNLPFDGPGGILAHAFFPKTHREGDVAAHEFGHVLGLQHTTAAKALMSPFYTFRYPLSLSPDDRRGIQHLYGRPRLAPTSRPPDLGPGARVDTNEIAPLEPDAPPDACQVSFDAVATIRGELFFFKAGFVWRLRGGRLQPGYPALASRHWQGLPTSVDAAFEDAQGHIWFFQGAQYWVYDGEKPVLGPAPLSELGLLGSLVHAALVWGPEKNKIYFFRGGDYWRFHPSTRRVDSPVPRRATDWRGVPSEIDAAFQDADGYAYFLRGRLYWKFDPVKVKALEGFPRLVGPDFFGCTEPANTFR*