Part of scaffold_2185 (Scaffold)

For more information consult the page for scaffold_2185 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOXA10 ENSTTRG00000003476 (Bottlenosed dolphin)

Gene Details

homeobox A10

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003258, Bottlenosed dolphin)

Protein Percentage 97.46%
cDNA percentage 98.47%
Ka/Ks Ratio 0.34104 (Ka = 0.0111, Ks = 0.0325)

BT.71665 ENSBTAG00000040082 (Cow)

Gene Details

homeobox protein Hox-A10

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000055322, Cow)

Protein Percentage 95.96%
cDNA percentage 96.04%
Ka/Ks Ratio 0.13669 (Ka = 0.0179, Ks = 0.131)

HOXA10  (Minke Whale)

Gene Details

homeobox A10

External Links

Gene match (Identifier: BACU003774, Minke Whale)

Protein Percentage 99.2%
cDNA percentage 99.29%
Ka/Ks Ratio 0.17669 (Ka = 0.0035, Ks = 0.0197)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1236 bp    Location:148969..152345   Strand:+
>bmy_19817
ATGTCAGCCAGAAAGGGCTATCTGCTTCCTTCGCCAAATTATCCCACAACAATGTCATGCTCGGAGAGCCCCGCCGCGAACTCTTTCTTGGTCGACTCGCTCATCAGCTCCGGCAGAGGCGAGGCTGGCGGTGGTGGCAGCGGCGCGGGAGGCGGCGGCGGCGGCGGCTACTATGCCCACGGCGGGGTCTACCTGCCGTCGGCCGCCGACCTGCCCTACGGGCTGCAGAGCTGCGGGCTCTTCCCGGCTCTGGGAGGCAAGCGCAATGAGGCGGCGTCGCCGGGCGGCGGTGGTGGCAGCGGGGGCCTGGGTTCCGGGGCTCACGGCTACGCGCCCGCGCCTATAGATCTGTGGCTGGAAGCGCCCCGGTCATGCCGGCTGGAGCCGCCCGAAGGGCCGCCGCCGCCGCAGCCCCAGCAGCAGCCGCCGCCCCAGCCGCAACCACCCCAGCCCCCGCCGCAGGCCACCTCGTGCTCTTTCGCGCAGAACATCAAAGAGGAGAGCTCCTACTGCCTCTACGACTCCGCTGACAAATGCCCCAAAGGCTCGTCCGCCACTGCCGAGCTGGGCCCCTTCCCGCGGGGCCCGCCGCCTGACGGCTGCGCCCTGGGCACCTCCAGCGGGGTGCCAGTGCCTGGCTACTTCCGCCTCTCTCAGACCTATGGCACCGCCAAGGGCTATGGCAGCGGCGGCGGCGCGCAGCAGCTCGGCGCCGGCCCGTTCCCTGCTCAGCCCCCGGGGCGCGGCTTCGACCCGCCACCCGCGCTCGCCTCCGGTTCTGCGGATGCAGCCCGGAAGGAGCGAGCCCTCGATTCGCCGCCGCCCCCCACGCTGGCTTGCGGTGGCGGCGGCGGGGGCTCGCAGGGCGACGAGGAGGCGCACGCGTCGTCTTCGGCTGCGGAGGAGCTCTCCCCCGCCCCTTCCGAGAGCAGCAAAGCCTCGCCCGAGAAGGACTCCCTGGGCAATTCCAAAGGCGAAAACGCAGCCAACTGGCTCACTGCAAAGAGCGGCCGGAAGAAACGCTGCCCCTACACCAAGCACCAGACGCTGGAGCTGGAAAAGGAGTTTCTGTTCAACATGTACCTTACTCGAGAGCGGCGCCTAGAGATCAGCCGCAGCGTCCACCTCACGGACAGACAAGTTAAAATCTGGTTTCAGAACCGCAGGATGAAACTGAAGAAAATGAACCGAGAAAACCGGATCCGGGAGCTCACAGCCAACTTTAATTTTTCCTGA

Related Sequences

bmy_19817T0 Protein

Length: 412 aa      View alignments
>bmy_19817T0
MSARKGYLLPSPNYPTTMSCSESPAANSFLVDSLISSGRGEAGGGGSGAGGGGGGGYYAHGGVYLPSAADLPYGLQSCGLFPALGGKRNEAASPGGGGGSGGLGSGAHGYAPAPIDLWLEAPRSCRLEPPEGPPPPQPQQQPPPQPQPPQPPPQATSCSFAQNIKEESSYCLYDSADKCPKGSSATAELGPFPRGPPPDGCALGTSSGVPVPGYFRLSQTYGTAKGYGSGGGAQQLGAGPFPAQPPGRGFDPPPALASGSADAARKERALDSPPPPTLACGGGGGGSQGDEEAHASSSAAEELSPAPSESSKASPEKDSLGNSKGENAANWLTAKSGRKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKKMNRENRIRELTANFNFS*