Part of scaffold_2185 (Scaffold)

For more information consult the page for scaffold_2185 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HOXA1 ENSBTAG00000013263 (Cow)

Gene Details

homeobox protein Hox-A1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000001367, Cow)

Protein Percentage 98.49%
cDNA percentage 96.59%
Ka/Ks Ratio 0.05745 (Ka = 0.007, Ks = 0.1225)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 999 bp    Location:227238..228725   Strand:+
>bmy_19823
ATGGACAATGCAAGAATGAGCTCCTTCCTGGAATACCCCATCCTCAGCGGTGGCGACTCGGGGACCTGCTCAGCGCGAGCCTACCCCTCCGACCATGGAATTACAACTTTCCAGTCGTGCGCGGTCAGTGCCAACAGCTGTGGCGGCGACGACCGCTTCCTAGTGGGCAGGGGGGTGCAGATCAGCCCGCCCCACCACCACCACCATCACCACCCCCAGCCGGCCACCTACCAGACTCCTGGGAACCTGGGGGTATCCTACTCCCACTCGAGTTGTGGTCCAAGCTACGGCGCGCAGAACTTCGGCGCGCCTTACAGCCCCTACGCGTTAAATCAGGAAGCAGAAGTAAGTGGTGGGTACCCCTCGTGCGCTCCCGCTGTTTACTCTGGAAATCTCTCATCTCCCATGGTCCAGCATCACCACCACCACCAGGGTTATGCCGGGGGCGCGGTGGGCTCGCCTCAGTACATTCACCACTCATATGGACAAGAGCACCAGAGCCTGGCCCTGGCCACGTATAATAACTCCTTGTCCCCTCTCCACGCCAGCCACCAAGAAGCCTGTCGCTCCCCTGCATCAGAGACATCTTCTCCAGCACAGACCTTTGACTGGATGAAAGTCAAAAGAAACCCTCCCAAAACAGGGAAAGTCGGAGAGTATGGCTACGTGGGTCAACCGAATGCAGTGCGTACCAACTTCACCACTAAACAGCTCACGGAGCTGGAGAAGGAGTTTCACTTCAACAAGTACTTGACGCGCGCCCGCAGGGTGGAGATTGCCGCATCCCTGCAGCTCAATGAGACCCAGGTGAAGATCTGGTTCCAGAACCGCCGAATGAAGCAGAAGAAACGAGAGAAGGAGGGCCTCTTGCCCATCTCTCCAGCCACTCCGACGGGAAGCGAAGAGAAGGCCGAGGAATCCTCAGAGAAGTCCAGCTCCTCACCCTGCGTTCCTTCCCCGGGGTCTTCTACCTCAGACACTCTACCTACCTCCCACTGA

Related Sequences

bmy_19823T0 Protein

Length: 333 aa      View alignments
>bmy_19823T0
MDNARMSSFLEYPILSGGDSGTCSARAYPSDHGITTFQSCAVSANSCGGDDRFLVGRGVQISPPHHHHHHHPQPATYQTPGNLGVSYSHSSCGPSYGAQNFGAPYSPYALNQEAEVSGGYPSCAPAVYSGNLSSPMVQHHHHHQGYAGGAVGSPQYIHHSYGQEHQSLALATYNNSLSPLHASHQEACRSPASETSSPAQTFDWMKVKRNPPKTGKVGEYGYVGQPNAVRTNFTTKQLTELEKEFHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPISPATPTGSEEKAEESSEKSSSSPCVPSPGSSTSDTLPTSH*