Sequence details bmy_19825 (Coding sequence)

Part of scaffold_2211 (Scaffold)

For more information consult the page for scaffold_2211 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GAPT ENSTTRG00000011660 (Bottlenosed dolphin)

Gene Details

GRB2-binding adaptor protein, transmembrane

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000011055, Bottlenosed dolphin)

Protein Percentage 87.26%
cDNA percentage 94.06%
Ka/Ks Ratio 3.06944 (Ka = 0.0776, Ks = 0.0253)

GAPT ENSBTAG00000016770 (Cow)

Gene Details

protein GAPT

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022304, Cow)

Protein Percentage 78.34%
cDNA percentage 87.47%
Ka/Ks Ratio 0.69093 (Ka = 0.1252, Ks = 0.1813)

GAPT  (Minke Whale)

Gene Details

GRB2-binding adaptor protein, transmembrane

External Links

Gene match (Identifier: BACU006245, Minke Whale)

Protein Percentage 90.45%
cDNA percentage 95.54%
Ka/Ks Ratio 2.91656 (Ka = 0.0545, Ks = 0.0187)

Additional orthologs identified in other species via the OPTIC pipeline.

GAPT (Human)   Gapt (Mouse)  

Genome Location

Sequence Coding sequence

Length: 474 bp    Location:301780..301307   Strand:-
Raw sequence 
>bmy_19825
ATGCTGAAAAGCTGTGGAAATACTTCAGTGGCCGTTTCCGTAGGAATTTCCCTTCTTTTACTGTTGGTGATCTGTGGAATTGGGTGTGTTTGGCACTGGAAACAGCATAATACAGTGCAATTTACCTTACCAAAGTTTTTGCAAAGGAGAAAAAGGAGAAAAGACTATACTAAAAGAGTCTGCTTGAGCCCCCAGGTTATCGGCCCAAGACATAAAATCTCAGTTCAAACCCAAGACCACAGCTCTGCTGGGAAGGACACTAACATACATGACGACTATGAAAATGTGGAAGCRTGTCCTCCCCAAGCTAAAGAAGAAACAGACAAGGGAGTATATGAAAACACTTGGCAGACCAATTTCAAGGAACATATCTATGGAAATGAGATACCATGTGACCGGTATAGCTGCCAGAAGCCTAGTGCTCCTGAAGAACCTCAAGATGAAGACATATATATTCTTCCGGATTCATATTAA

Related Sequences

bmy_19825T0 Protein

Length: 158 aa      View alignments
>bmy_19825T0
MLKSCGNTSVAVSVGISLLLLLVICGIGCVWHWKQHNTVQFTLPKFLQRRKRRKDYTKRVCLSPQVIGPRHKISVQTQDHSSAGKDTNIHDDYENVEACPPQAKEETDKGVYENTWQTNFKEHIYGNEIPCDRYSCQKPSAPEEPQDEDIYILPDSY*