Part of scaffold_2210 (Scaffold)

For more information consult the page for scaffold_2210 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

THSD4 ENSTTRG00000009393 (Bottlenosed dolphin)

Gene Details

thrombospondin, type I, domain containing 4

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008906, Bottlenosed dolphin)

Protein Percentage 97.64%
cDNA percentage 97.31%
Ka/Ks Ratio 0.15065 (Ka = 0.0123, Ks = 0.0818)

BT.38726 ENSBTAG00000011644 (Cow)

Gene Details

thrombospondin type-1 domain-containing protein 4 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053425, Cow)

Protein Percentage 93.41%
cDNA percentage 93.01%
Ka/Ks Ratio 0.12183 (Ka = 0.0303, Ks = 0.2487)

THSD4  (Minke Whale)

Gene Details

thrombospondin, type I, domain containing 4

External Links

Gene match (Identifier: BACU017947, Minke Whale)

Protein Percentage 97.84%
cDNA percentage 97.71%
Ka/Ks Ratio 0.1722 (Ka = 0.0114, Ks = 0.0664)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1611 bp    Location:130639..102406   Strand:-
>bmy_19842
ATGAATTCTGACAGTGTATGTGGGACCTTGCGAAGTCGTTCTGGCCGCTCCATCATCAACGGGAACTGGGCAATTGACCGGCCTGGAAAATATGAAGGAGGAGGGACCATGTTCACATACAAGCGACCAAATGAGATTTCGAGCACTGCCGGAGAGTCCTTTTTGGCCGAAGGTCCCACTAATGAGATCTTGGATGTCTATCAAGTGAAGAAACAAGAACTCCAGAGTACTCCAGATGACACAATAAAGCTTTGGAACTGTCCAGCTGGTGTTGGACTCCGGATGATACACCAGCAGCCTAACCCAGGAGTCCACTACGAGTACGTAATCATGGGGAGCAATGCCATCAGCCCACAGGTGCTGCCTCACAGGAGACCAGGGGAGCCCTTCAACGGCCAGCTGGTACCAGAAGGGGGGAGCCAGCAGGAGGGAGAAGGGAAAGAGGGGGACGAAGAGAAGGCAGACGTGCACGGYGGGGCACCTGAAATATTCACCTCGGAATCAGCACAGACCTTCCCGGTCAGGCATCCTGATAGATTCTCTCCCCACCGGCCAGACAATGTGGTACCACCAGCACCACAGACCCCACGGCGGAGCCGGGATCACAACTGGAAACAGCTGGGGACGACGGAGTGCTCGACAACCTGCGGGAAAGGATCGCAGTACCCTATTTTTCGCTGTGTGAACAGAAACACTCACGAAGAGGTTCCTGAGAGCTACTGTGACTCGAGCATGAAGCCGACCCCGGAGGAGGAACCCTGCAACATCTTCCCTTGCCCAGCCTTCTCACCTCTGTGCTCGGTGCCCTGCGGAGTGGGGCAGAGGACCCGCGACGTGAAGTGTGTGAGCAACATCGGGGACGTGGTCGATGACGAGGAATGCAACATGAAGCTCCGGCCCAACGACATTGAGAACTGCGACATGGGACCCTGCGCCAAGAGCTGGTTCCTGACGGAGTGGAGCGAGAGGTGCTCGGCAGAGTGTGGGGCTGGAGTGCGGACACGGTCGGTGGTGTGCATGACCAACCACGTCAGCAGCCTGCCCCTGGAGGGCTGCGGGAACAACCGGCCAGCGGAGGCCACCCCGTGTGACAACGGGCCCTGCACGGGCGAGGTGGAGTGGTTTGCGGGAAGCTGGAGTCAGTGTTCCATCGAGTGTGGGAGCGGGACCCAACAGAGGGAGGTGATTTGTGTTAGGAAGAACGCTGACACCTTTGAAGTGCTGGACCCCTATGAATGTTCCTTCCTGGAGAGACCCCCCAGCCAGCAATCCTGCCACCTCAAGCCCTGCGGAGCCAAATGGTTTAACACAGAATGGAGCATGTGTTCCAAGAGCTGCCAGGGCGGCTTCCGCGTCCGGGAAGTGCGCTGTCTGTCTGATGAGATGACCCTAAGTAATCTCTGTGACCCTCAGTTGAAACCAGAAGAGAAAGAATCTTGTAACCCTCAGGACTGCGTCCCTGAAGTTGACGAAAACTGCAAGGACAGATACTACAACTGCAACGTGGTGGTCCAGGCCAGGCTCTGCGTCTACAACTACTACAAGACCGCCTGCTGCGTCTCCTGCACGCGCGTGGCCAATAGGCACTCGGGCTTCCTGGGGAGCAGATAA

Related Sequences

bmy_19842T0 Protein

Length: 537 aa      View alignments
>bmy_19842T0
MNSDSVCGTLRSRSGRSIINGNWAIDRPGKYEGGGTMFTYKRPNEISSTAGESFLAEGPTNEILDVYQVKKQELQSTPDDTIKLWNCPAGVGLRMIHQQPNPGVHYEYVIMGSNAISPQVLPHRRPGEPFNGQLVPEGGSQQEGEGKEGDEEKADVHGGAPEIFTSESAQTFPVRHPDRFSPHRPDNVVPPAPQTPRRSRDHNWKQLGTTECSTTCGKGSQYPIFRCVNRNTHEEVPESYCDSSMKPTPEEEPCNIFPCPAFSPLCSVPCGVGQRTRDVKCVSNIGDVVDDEECNMKLRPNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHVSSLPLEGCGNNRPAEATPCDNGPCTGEVEWFAGSWSQCSIECGSGTQQREVICVRKNADTFEVLDPYECSFLERPPSQQSCHLKPCGAKWFNTEWSMCSKSCQGGFRVREVRCLSDEMTLSNLCDPQLKPEEKESCNPQDCVPEVDENCKDRYYNCNVVVQARLCVYNYYKTACCVSCTRVANRHSGFLGSR*