Sequence details bmy_19847 (Coding sequence)

Part of scaffold_2195 (Scaffold)

For more information consult the page for scaffold_2195 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

USP28 ENSTTRG00000002185 (Bottlenosed dolphin)

Gene Details

ubiquitin specific peptidase 28

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002048, Bottlenosed dolphin)

Protein Percentage 92.66%
cDNA percentage 92.91%
Ka/Ks Ratio 0.24503 (Ka = 0.0089, Ks = 0.0362)

BT.24505 ENSBTAG00000002323 (Cow)

Gene Details

ubiquitin carboxyl-terminal hydrolase 28

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000002998, Cow)

Protein Percentage 96.1%
cDNA percentage 93.87%
Ka/Ks Ratio 0.10904 (Ka = 0.0211, Ks = 0.1931)

USP28  (Minke Whale)

Gene Details

ubiquitin specific peptidase 28

External Links

Gene match (Identifier: BACU004006, Minke Whale)

Protein Percentage 99.36%
cDNA percentage 98.96%
Ka/Ks Ratio 0.12085 (Ka = 0.0035, Ks = 0.0288)

Additional orthologs identified in other species via the OPTIC pipeline.

USP28 (Human)   Usp28 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3465 bp    Location:264003..320943   Strand:+
Raw sequence 
>bmy_19847
ATGACTGCGGAGCTGCAGCAGGACGACGCGGCCGGAGCAGCCGACCGCCACGGCTCGAGCTGCCAAATGCTGTTAAATCAACTGAGGGAAATCACAGGCATTCAGGACCCTTCTTTTCTTCATGAAGCTCTGAAGGCCAGTAATGGTGACATCACCCGGGCAGTCAGCCTTCTCACTGACGAAAGAGTTAAGGAGCCCAGCCAGGAGACTGCTGCTACCGAACCATCTGAAGTAGCGGGCAGTGCTGCCAGCAAAGAAGAATTAGCAAGTASGTATATCCTGGCTTGGTCCCGCTCTGAACTAGCAGAGAAAGTAATAGACCTTACTCATGATAACAAAGATGATCTTCAGGCCGCCATTGCTTTGAGTCTGCTGGAGTCCCCCAAAATTCAAGCTGATGGAAGAGATCTTAACAGGATGCACGAGGCAACCTCTGCAGAAACTAAACGCTCAAAGAGAAAACGCTGTGAAGTCTGGGGAGAAAATCCCAATCCCAACGACTGGAGGCGAGTTGATGGTTGGCCCGTTGGGCTGAAAAACGTTGGCAATACGTGTTGGTTTAGTGCTGTTATTCAGTCTCTGTTTCAATTGCCTGAATTCCGAAGACTTGTCCTCAGCTATAGCCTACCACAGAACGTACTTGAAAATTGTCCAAGTCACACGGAAAAGAGAAATATCGTGTTTATGCAAGAGCTTCAGTATTTGTTTGCTCTGATGATGGGATCAAATCGCAAGTTTGTAGACCCTTCAGCAGCCCTGGACCTCTTAAAGGGGGCATTCCGATCGCCTGAGGAGCAGCAGCAAGATGTGAGTGAATTCACACACAAGCTCCTGGATTGGCTAGAGGACGCATTCCAGCTAGCTGTTAATGTTAACAGCAATCCCAGGAACAAATCTGAAAATCCAATGGTGCAGCTATTCTACGGTACTTTCCTCACTGAAGGGATTCATGAAGGGAAGCCCTTTTGTAACAATGAGACCTTCGGCCAGTATCCCCTTCAGGTAAATGGTTATCGCAACTTAGACGAATGTTTGGAAGGGGCCATGGTGGAGGGTGACATTGAGCTGCTTCCTTCCGATCATTCAGTGAAATATGGACAAGAGCGTTGGTTTACAAAACTACCTCCGGTGTTGACCTTTGAACTCTCAAGATTTGAGTTCAATCAGTCCCTTGGTCAGCCAGAGAAAATTCACAATAAGCTGGAATTTCCTCAGATCATTTATATGGACAGGAGCAAAGAGCTTGTTCGAAGTAAAAGAGAGTGTATTCGAAAGTTGAAAGAGGAAATAAAAGTTCTGCAGCAAAAACTGGAAAGGTATGTGAAGTACGGCTCGGGCCCGGCTCGGTTCCCACTCCCAGACATGTTGAAATATGTTATTGAATTTGCTAGTACAAAACCTGCCTCAGAAAACTCTGCATCTCAAAGTGATGCACGCGTGACGTTACCACTTTCTTCTGCGCACTGCCCAGCTTCTGACCTGATATCCAAGGAAAGTACAAGTAAAGAGAGCACGTCTCAAGATGCTGAAAGTACCTTTTCTTCTGAAGATTCTCTACACAAGTCTAAGATGGCGAATCAGCCACTTATACCTTCCCGATCTTGCATGGAAATGCCCTCACACCCAGCTCCTCGAACGGTCACAGATGAGGAGATAAACTTTGTTAAGACCTGCCTTCAGAGGTGGAGGAGCGAGATTGAACAAGATATACAAGATTTAAAGAACTGTATTGCAAGCACTACCCAGACTATTGAGCAGATGTACTGTGATCCTCTCCTCCGTCAGGTGCCTTATCGTTTGCATGCAGTTCTTGTTCATGAAGGACAAGCAAATGCAGGACACTACTGGGCCTATATCTATAATCAGCCCCGACAAGTCTGGCTCAAGTACAACGACATCTCTGTTACCGAGTCTTCCTGGGAAGAACTTGAAAGAGATTCCTATGGGGGCCTGAGAAATGTTAGTGCTTACTGCCTGATGTACATTAACGACAAGCTACCCCACTTCAGTGCAGAGGCGGCCCCGAATGAATTAGATCAGATGTCAGGAGAAGTGGAAGCCCTCTCTGTTGAACTTAAGCATTACATTCAGGAAGATAACTGGAGGTTTGAGCAGGAAGTAGAGGAGTGGGAAGAAGAGCAGTCTTGCAAAATCCCCCAAATGGAGTCTTCCACCAGCTCAGCATCACAGGATTTCTCTCCATCACAAGAGTCTTCCGTCGCCTCTTCCCACGGGGCTCGCTGCCTGTCCTCCGAGCATGCCGTGATCGTGAAGGAGCAGACCGCGCAGGCTATTGCAAACACGGCACGCGCCTACGAGAAGAGTGGTGTGGAAGCAGCGTTGAGTGAGCTTAAGGAAGCTGAACCCCAGAAGCCCATGTCCCCGGAAACAGACCTTGCAGAGCAGCCCGAGCAGCCCGCACAGGCTCGTGACGCAGAGTCTGCTGCCCAGCCTAATGCTGAGGTCTCTGAAGTCGAGATTCCCAGTGTGGGAAGGATTCTGGTTAGATCTGATGCAGATGGATATGATGAGGAGGTGATGCTGAGCCCTGCCATGCAAGGGGTCATCCTGGCCATAGCTAAAGCCCGTCAGACCTTTGACCGAGATGGGTCTGAAGCAGGGCTTATTAAGGCATTCCATGAAGAGTACTCCAGGCTCTATCAGCTCGCCAAAGAGACCCCCACCTCTCACAGTGATCCTCGACTTCAGCATGTGCTTGTCTACTTCTTCCAGAATGAAGCGCCTAAAAGGGTAGTAGAGCGGACCCTTCTGGAACAATTTGCAGACAAAAATCTTAGCTATGATGAAAGGTCAATCAGTATTATGAAGGTGGCTCAAGCGAAATTGAAGGAGATTGGTCCAGATGACATGAATATGGAGGAGTACAAGAAGTGGCATGAAGATTACAGTTTGTTTCGAAAGGTGTCTGTGTATCTCCTGACAGGCCTGGAACTCTATCAGAAAGGAAAGTACCAAGAGGCGCTTTCCTACCTGGTGTACGCCTACCAGAGCAATGCTGCTCTGCTGATGAAGGGGCCCCGGCGGGGCGTGAAAGAGTCGGTGATCGCCTTATACCGAAGAAAATGCCTTCTGGAGCTGAATGCCAAAGCGGCTTCTCTCTTTGAAACAAATGATGAGCACTCTGTAACAGAGGGTATTAATGTGATGAATGAGTTGATCATTCCCTGCATTCACCTTATCATTAATAACGACATCTCCAAGGATGACTTGGATGCCATTGAGATCATGAGAAACCACTGGTGCTCTTACCTTGGGCAAGATATTGCAGAAAATCTGCAGCTGTGCTTAGGGGAGTTTCTACCCAGACTTCTAGATCCTTCTGCAGAAATCATTGTCTTAAAGGAGCCTCCAACTATTCGACCCAATTCGCCCTATGACCTTTGTAGCAGGTTTGCAGCTGTCATGGAGTCAATTCAAGGAGTGTCAACTGTGACAGTGAAATAA

Related Sequences

bmy_19847T0 Protein

Length: 1155 aa      View alignments
>bmy_19847T0
MTAELQQDDAAGAADRHGSSCQMLLNQLREITGIQDPSFLHEALKASNGDITRAVSLLTDERVKEPSQETAATEPSEVAGSAASKEELASXYILAWSRSELAEKVIDLTHDNKDDLQAAIALSLLESPKIQADGRDLNRMHEATSAETKRSKRKRCEVWGENPNPNDWRRVDGWPVGLKNVGNTCWFSAVIQSLFQLPEFRRLVLSYSLPQNVLENCPSHTEKRNIVFMQELQYLFALMMGSNRKFVDPSAALDLLKGAFRSPEEQQQDVSEFTHKLLDWLEDAFQLAVNVNSNPRNKSENPMVQLFYGTFLTEGIHEGKPFCNNETFGQYPLQVNGYRNLDECLEGAMVEGDIELLPSDHSVKYGQERWFTKLPPVLTFELSRFEFNQSLGQPEKIHNKLEFPQIIYMDRSKELVRSKRECIRKLKEEIKVLQQKLERYVKYGSGPARFPLPDMLKYVIEFASTKPASENSASQSDARVTLPLSSAHCPASDLISKESTSKESTSQDAESTFSSEDSLHKSKMANQPLIPSRSCMEMPSHPAPRTVTDEEINFVKTCLQRWRSEIEQDIQDLKNCIASTTQTIEQMYCDPLLRQVPYRLHAVLVHEGQANAGHYWAYIYNQPRQVWLKYNDISVTESSWEELERDSYGGLRNVSAYCLMYINDKLPHFSAEAAPNELDQMSGEVEALSVELKHYIQEDNWRFEQEVEEWEEEQSCKIPQMESSTSSASQDFSPSQESSVASSHGARCLSSEHAVIVKEQTAQAIANTARAYEKSGVEAALSELKEAEPQKPMSPETDLAEQPEQPAQARDAESAAQPNAEVSEVEIPSVGRILVRSDADGYDEEVMLSPAMQGVILAIAKARQTFDRDGSEAGLIKAFHEEYSRLYQLAKETPTSHSDPRLQHVLVYFFQNEAPKRVVERTLLEQFADKNLSYDERSISIMKVAQAKLKEIGPDDMNMEEYKKWHEDYSLFRKVSVYLLTGLELYQKGKYQEALSYLVYAYQSNAALLMKGPRRGVKESVIALYRRKCLLELNAKAASLFETNDEHSVTEGINVMNELIIPCIHLIINNDISKDDLDAIEIMRNHWCSYLGQDIAENLQLCLGEFLPRLLDPSAEIIVLKEPPTIRPNSPYDLCSRFAAVMESIQGVSTVTVK*