Part of scaffold_2199 (Scaffold)

For more information consult the page for scaffold_2199 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PTPDC1 ENSTTRG00000003619 (Bottlenosed dolphin)

Gene Details

protein tyrosine phosphatase domain containing 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003394, Bottlenosed dolphin)

Protein Percentage 97.37%
cDNA percentage 98.42%
Ka/Ks Ratio 0.53047 (Ka = 0.0128, Ks = 0.0241)

PTPDC1 ENSBTAG00000005803 (Cow)

Gene Details

protein tyrosine phosphatase domain-containing protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000007630, Cow)

Protein Percentage 92.89%
cDNA percentage 93.85%
Ka/Ks Ratio 0.27553 (Ka = 0.0378, Ks = 0.1373)

PTPDC1  (Minke Whale)

Gene Details

protein tyrosine phosphatase domain containing 1

External Links

Gene match (Identifier: BACU009365, Minke Whale)

Protein Percentage 98.69%
cDNA percentage 99.26%
Ka/Ks Ratio 0.58626 (Ka = 0.0063, Ks = 0.0107)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2286 bp    Location:249894..231517   Strand:-
>bmy_19859
ATGCAGGATCCACCCCGGAGGCTCTCTGCTGTGCCATTCCTCAGCTCCTTTTTCCAGGGCCGACGACACTCTGCCTCCGACCCCATCCTGCGACTGCAGCAGGGGCGGCGCAGCTCCACTGCCAAGATGCTCTCCTCATCCTCTCTCCAGGTGATGGTGGCCATGTCCTCTGTCAGCTGTGCTGAGAGAAACCCAACTTGCCCCAAGAGAAAAAGAAATTCAGGACGTCCAACACCAAAGTATACAAAAGTTGGAGAGCGTTTACGGCATGTCATTCCTGGACATATGGCCTGTTCCATGGCATGTGGTGGCAAAGCTTGCAAGTATGAAAATGCAGCCCGCTGGAGTGAACAGGAGCAAGCTATTAAGGGGGTCTACTCGTCCTGGGTCACTGATAATATCCTGGCCATGGCACGCCCGTCCACTGAGCTCCTCGAGAAGTACTGCATCATCGAGCAGTTCCGAAGCCATGGCATAAAAAGTATCATCAACCTGCAGCGTCCTGGTGAGCATGCCAGCTGTGGGAACCCGCTGGAACAAGAAAGTGGCTTCACATACCTTCCTGAAGCTTTCATGGAGGCTGGCATTTATTTCTACAATTTTGGATGGAAGGATTATGGTGTAGCATCCCTTACCACCATCTTAGATATGGTGAAGGTGATGACATTTGCCTTACAAGAAGGAAAAGTAGCTATCCATTGTCATGCAGGGCTTGGTCGAACAGGTGTTTTAATAGCATGTTACTTAGTTTTTGCAACAAGAATGACTGCTGACCAAGCAATTATATTTGTTCGGGCAAAGCGACCTAATTCCATACAAACCCGAGGACAGCTACTATGTGTAAGGGAATTTACTCAGTTTCTGATTCCTCTTCGCAATATATTCTCTTGCTGTGACCCCAAGGCACATGCTGTCACCTTAGCACAGTATCTCATTCGTCAGCGGCATCTGCTTCATGGCTATGAGGCACGACTTCTGAAACATGTACCCAAAATTATCCATCTCGTGTGCAAATTGTTGCTGGACTTAGCTGAGAACAGGCCAGTAGTGACGGAAGAAGTGGCAGAAGTACCTGGCCTCTCTGCTGAAATTGAAAAGACTGTTTCTGAGATGGTCACAATGCAGCTGGATAAAGAGTTACTGAGACATGACAGTGATGCATCGGACTCTTTCACCCCCAATGCAGTGGTGGCAGATTTTGAGAATCAGGATGTGATTCTTTCCAGTGAGCAAGAGTTTGACCCTCTTTGGAAGAGGCGGAATGTTGAGTGCCTTCAGCCCCTGACTCGTCTGAAAAGGCAGCTCAGCTACAGTGACTCAGACTTAAAGAGAGCCGAGTCACTTCTGGAGCAAGGGAGGACTCCGTGGACAGTGCCTGCCCAGGCCTTGCTTTGCCATAACCCCAGGCAGCAGAAGCACATAAGCCATTGTTACTCCCCACAGTCTCCACAGCTAGATTTAAATAAGGAAACGCTGGTCCGCAATACATTTTCTTTCTGGAATCACGCTAAATTTGGAGGCCTGGAAGGACTCAAAGATGACAGGTCATCAATTTTCCATAGGACGAACATTCCAAAGGAAGTACAGCGAAGTAGAACCTTCTCTTCAGGTATTTCAGGTTCATACAACCCTGGGGAACCAGTTACACCAAACTTTGCAAATATCCCTAAGGAACTAAACTGTTCTCACCAGCAAGTGTCCCACTGTGAGTGTGAAACTCATGGTGGTTGTGGCCCAAGCTCCGTTGCGGAGGACAGTGAGACTTGCCGCCGCCCTGTGGACTGTGCGTCCAGTCCCAAAGCACAGTTCTTGGTTGGACCTGAAACCCGGGATAGCAAATATCTGTCTGAAGTTGCTCCATACACGGCTTTACAGTCTGACTTGAGTGTTGAAGCAAGGAGAATACTGGCAGCCAAAGCCCTGGCAAATTTAAATGAGATTGCAGAAAAGGAGGAAGTGAAAAAGAAGGTAGAAATGTGGCAGAAAGAACTAAATTCCCGAGATGGAGCTTGGGAAAGAATATGTGGCGAAAGGGATCCTTTCATCCTGTGCAGTTTGATGTGGTCTTGGGTGGAGCAGCTGAAGGAGCCTGTGATAACCAAAGAGGACGTGGACATGTTGGTTGACAGATCTGCGGATGCCGCAGAAGCACTGTTTTTATTAGAGAAGGTTAATTTTGATTCTGAAAATGGACCAATAGTTTACAACACCCTGAAGAAAATATTTAAGAACACACTGGAAGAAAAAAGAAAAATGACAAAAGATGGCCCTAAGCCTGGCGTTTAG

Related Sequences

bmy_19859T0 Protein

Length: 762 aa      View alignments
>bmy_19859T0
MQDPPRRLSAVPFLSSFFQGRRHSASDPILRLQQGRRSSTAKMLSSSSLQVMVAMSSVSCAERNPTCPKRKRNSGRPTPKYTKVGERLRHVIPGHMACSMACGGKACKYENAARWSEQEQAIKGVYSSWVTDNILAMARPSTELLEKYCIIEQFRSHGIKSIINLQRPGEHASCGNPLEQESGFTYLPEAFMEAGIYFYNFGWKDYGVASLTTILDMVKVMTFALQEGKVAIHCHAGLGRTGVLIACYLVFATRMTADQAIIFVRAKRPNSIQTRGQLLCVREFTQFLIPLRNIFSCCDPKAHAVTLAQYLIRQRHLLHGYEARLLKHVPKIIHLVCKLLLDLAENRPVVTEEVAEVPGLSAEIEKTVSEMVTMQLDKELLRHDSDASDSFTPNAVVADFENQDVILSSEQEFDPLWKRRNVECLQPLTRLKRQLSYSDSDLKRAESLLEQGRTPWTVPAQALLCHNPRQQKHISHCYSPQSPQLDLNKETLVRNTFSFWNHAKFGGLEGLKDDRSSIFHRTNIPKEVQRSRTFSSGISGSYNPGEPVTPNFANIPKELNCSHQQVSHCECETHGGCGPSSVAEDSETCRRPVDCASSPKAQFLVGPETRDSKYLSEVAPYTALQSDLSVEARRILAAKALANLNEIAEKEEVKKKVEMWQKELNSRDGAWERICGERDPFILCSLMWSWVEQLKEPVITKEDVDMLVDRSADAAEALFLLEKVNFDSENGPIVYNTLKKIFKNTLEEKRKMTKDGPKPGV*