Part of scaffold_2249 (Scaffold)

For more information consult the page for scaffold_2249 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BT.53717 ENSBTAG00000044207 (Cow)

Gene Details

ras-related protein Rab-2B

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053762, Cow)

Protein Percentage 87.5%
cDNA percentage 87.5%
Ka/Ks Ratio 0.3039 (Ka = 0.0937, Ks = 0.3082)

RAB2B  (Minke Whale)

Gene Details

RAB2B, member RAS oncogene family

External Links

Gene match (Identifier: BACU008609, Minke Whale)

Protein Percentage 85.19%
cDNA percentage 87.5%
Ka/Ks Ratio 0.64104 (Ka = 0.124, Ks = 0.1934)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 774 bp    Location:172137..185644   Strand:+
>bmy_19922
ATGACTTATGCTTATCTCTTCAAGTACATCATCATCGGGGACACAGGTGTGGGGAAGTCATGTCTCCTCCTGCAGTTTACAGACAAGAGGTTCCAGCCTGTCCACGACCTCACAATAGGTGTGGAGTTTGGGGCCCGTATGGTCAACATTGATGGAAAACAAATCAAACTGCAAATCTGGGATACGGCTGGACAAGAATCCTTCCGTTCCATCACCCGTTCCTACTACAGGGGAGCAGCCGGAGCACTGCTGGTGTACGACATTACAAGGCGTGAAACCTTCAACCACCTGACCTCGTGGTTAGAGGATGCCCGGCAGCACTCTAGCTCCAACATGGTTATCATGCTGATTGGGAATAAGAGTGACTTAGAATCCCGTAGGGATGTGAAGAGAGAAGAGGGAGAGGCCTTTGCTCGGGAACATGGACTTATATTCATGGAAACGTCAGCCAAAACAGCCTGCAATGTTGAAGAGGCCTTCATTAACACAGCCAAAGAAATATATAGGAAGATCCAGCAGGGTTTATTTGATGTCCACAATGAGGTACACAGAAACCTGTCATCCTTTTCATTTTTTCTCAAGCAAATGGCATCAAGATTGGCCCCCAGCAGTGTATTTCAACATCAGTGGGACCCAGTGCCTCCCAGCGGAGCTCTCGTGACATGGGGTCCGACTCTGGCTGCTGCTGAACATCTGGCCTGGACTCTTTTTTCCTTCCTGGAACAGCTTCAGATCAATAGGCTTAAAGAAAGAGGTCTTACTTGCTTTGGCTGA

Related Sequences

bmy_19922T0 Protein

Length: 258 aa      View alignments
>bmy_19922T0
MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHNEVHRNLSSFSFFLKQMASRLAPSSVFQHQWDPVPPSGALVTWGPTLAAAEHLAWTLFSFLEQLQINRLKERGLTCFG*