Part of scaffold_2243 (Scaffold)

For more information consult the page for scaffold_2243 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ATP6V1A ENSTTRG00000009858 (Bottlenosed dolphin)

Gene Details

ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009351, Bottlenosed dolphin)

Protein Percentage 96.09%
cDNA percentage 95.6%
Ka/Ks Ratio 0.07099 (Ka = 0.0023, Ks = 0.0324)

ATP6V1A ENSBTAG00000002703 (Cow)

Gene Details

V-type proton ATPase catalytic subunit A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000050728, Cow)

Protein Percentage 99.68%
cDNA percentage 96.7%
Ka/Ks Ratio 0.01131 (Ka = 0.0015, Ks = 0.133)

ATP6V1A  (Minke Whale)

Gene Details

ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A

External Links

Gene match (Identifier: BACU009324, Minke Whale)

Protein Percentage 99.83%
cDNA percentage 99.53%
Ka/Ks Ratio 0.05103 (Ka = 0.0008, Ks = 0.0158)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1857 bp    Location:98825..68776   Strand:-
>bmy_19944
ATGATGGATTTCTCCAAGCTACCCAAAATACGTGATGAAGATAAAGAAAGCACGTTTGGTTTTGTGCATGGGGTCTCAGGACCTGTGGTTACAGCTTGTGACATGGCAGGTGCAGCCATGTATGAACTGGTGAGAGTGGGCCACAGTGAGTTGGTTGGAGAGATTATCCGATTGGAGGGTGACATGGCCACTATCCAGGTGTATGAAGAAACCTCTGGTGTGTCTGTTGGAGATCCTGTACTCCGCACTGGGAAACCCCTCTCAGTAGAGCTTGGTCCTGGCATTATGGGAGCCATTTTTGATGGTATTCAAAGACCTTTGTCGGATATCAGCAGTCAGACTCAAAGTATTTACATTCCCAGAGGAGTAAATGTGTCTGCTCTTAGCAGAGATGTCAAATGGGATTTCACACCTTGCAAAAACCTACGGGTTGGTAGTCACATCACTGGTGGAGATATTTATGCAATTGTCAACGAGAACTCACTCATCAAACACAAAATCATGTTGCCCCCACGAAACAGAGGAACTGTCACTTACATTGCTCCACCTGGAAATTACGATACCTCTGATGTTGTGTTGGAGCTTGAATTTGAAGGTATAAAGGAGAAGTTCAGCATGGTCCAAGTATGGCCTGTACGTCAGGTTCGGCCTGTCACTGAGAAGTTGCCAGCTAATCATCCTCTGTTGACTGGCCAGAGAGTCCTTGATGCCCTTTTTCCATGTGTACAGGGAGGAACTACTGCAATCCCTGGGGCTTTTGGCTGTGGAAAGACGGTGATATCGCAGTCTCTATCCAAGTATTCCAACAGTGATGTGATCATCTACGTAGGATGTGGTGAGAGAGGAAATGAGATGTCTGAAGTCCTCCGGGACTTCCCAGAGCTCACGATGGAAGTTGATGGTAAGGTGGAGTCAATTATGAAGAGGACAGCGTTGGTAGCCAATACCTCTAATATGCCTGTTGCTGCTAGAGAAGCCTCTATTTATACTGGAATTACACTGTCGGAATATTTCCGTGACATGGGCTATCACGTCAGTATGATGGCTGACTCTACCTCTAGATGGGCTGAGGCTCTTAGAGAAATCTCTGGTCGCTTAGCTGAAATGCCTGCAGATAGTGGATATCCTGCATATCTCGGTGCCCGTCTGGCCTCATTCTATGAGCGAGCTGGCAGAGTGAAATGTCTTGGAAATCCTGAGAGAGAAGGGAGTGTCAGCATTGTAGGAGCAGTTTCTCCACCTGGTGGTGATTTTTCTGATCCAGTTACATCTGCTACTCTTGGTATTGTTCAGGTGTTCTGGGGCTTAGATAAGAAACTAGCTCAACGTAAGCATTTCCCGTCTGTCAACTGGCTCATCAGCTACAGCAAGTACATGCGTGCCTTGGATGAGTACTATGACAAACACTTCACAGAGTTTGTTCCTCTGAGGACCAAAGCTAAGGAGATTCTGCAGGAAGAAGAAGACTTGGCAGAAATTGTACAGCTTGTGGGAAAGGCTTCACTAGCAGAAACAGATAAAATCACTCTGGAGGTAGCAAAACTTATCAAAGATGATTTCCTTCAACAAAATGGATATACTCCTTATGACAGGTTCTGCCCATTCTACAAGACAGTAGGGATGCTGTCCAACATGATTGCATTTTATGATATGGCCCGCAGAGCTGTTGAAACCACTGCCCAGAGTGACAATAAAATCACATGGTCCATTATCCGTGAGCACATGGGGGAGATCCTCTATAAGCTTTCCTCCATGAAATTCAAGGATCCAGTGAAAGATGGTGAGGCAAAGATCAAGGCCGACTATGCACAACTTCTTGAAGATATGCAGAATGCATTCCGTAGCCTTGAAGATTAG

Related Sequences

bmy_19944T0 Protein

Length: 619 aa      View alignments
>bmy_19944T0
MMDFSKLPKIRDEDKESTFGFVHGVSGPVVTACDMAGAAMYELVRVGHSELVGEIIRLEGDMATIQVYEETSGVSVGDPVLRTGKPLSVELGPGIMGAIFDGIQRPLSDISSQTQSIYIPRGVNVSALSRDVKWDFTPCKNLRVGSHITGGDIYAIVNENSLIKHKIMLPPRNRGTVTYIAPPGNYDTSDVVLELEFEGIKEKFSMVQVWPVRQVRPVTEKLPANHPLLTGQRVLDALFPCVQGGTTAIPGAFGCGKTVISQSLSKYSNSDVIIYVGCGERGNEMSEVLRDFPELTMEVDGKVESIMKRTALVANTSNMPVAAREASIYTGITLSEYFRDMGYHVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLGARLASFYERAGRVKCLGNPEREGSVSIVGAVSPPGGDFSDPVTSATLGIVQVFWGLDKKLAQRKHFPSVNWLISYSKYMRALDEYYDKHFTEFVPLRTKAKEILQEEEDLAEIVQLVGKASLAETDKITLEVAKLIKDDFLQQNGYTPYDRFCPFYKTVGMLSNMIAFYDMARRAVETTAQSDNKITWSIIREHMGEILYKLSSMKFKDPVKDGEAKIKADYAQLLEDMQNAFRSLED*