Part of scaffold_2242 (Scaffold)

For more information consult the page for scaffold_2242 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TPD52 ENSTTRG00000000088 (Bottlenosed dolphin)

Gene Details

tumor protein D52

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000080, Bottlenosed dolphin)

Protein Percentage 81.28%
cDNA percentage 83.11%
Ka/Ks Ratio 0.83388 (Ka = 0.1782, Ks = 0.2137)

TPD52 ENSBTAG00000007335 (Cow)

Gene Details

tumor protein D52

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000049200, Cow)

Protein Percentage 74.58%
cDNA percentage 78.47%
Ka/Ks Ratio 0.54962 (Ka = 0.2216, Ks = 0.4031)

TPD52  (Minke Whale)

Gene Details

tumor protein D52

External Links

Gene match (Identifier: BACU018324, Minke Whale)

Protein Percentage 83.72%
cDNA percentage 87.75%
Ka/Ks Ratio 1.15156 (Ka = 0.143, Ks = 0.1242)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 861 bp    Location:291553..262320   Strand:-
>bmy_19963
ATGAGGTGTGGCTCAAACCTAATTGGCTTTATTCTGGCTGGGGCAGTGGAGGAGCCCAAAGGAGAATTTTACTTAGCTTTCATACCTTACAGACTTTTTTTTTTTTTTTTAAATCTCCATCAAGGTCTACTGAGAACAGACCCAGTACCCGAGGAAGGAGAAGATGTTGCTGCCACTATCAGTGCCACTGAGACCCTATCAGAGGAGGAGCAAGAAGAGCTAAGAAGGGAACTTGCAAAGGTAGAAGAAGAAATCCAGACTCTGTCTCAAGTGTTAGCAGCAAAAGAGAAGCACCTAACGGAGATCAAGCGGAAACTCGGGATCAATTCGCTACAGGAACTAAAACAGAACATTGCCAAAGGGTGGCAAGATGTGACAGCCACGTCTGCGTACAAGAAGACCTCTGAAACCTTATCTCAGGCTGGACAGAAGGCTTCAGCTGCTTTTTCATCTGTTGGATCAGTCATCACCAAAAAGCTGGAAGATGTAAAGTACTCGTTCTTGATCACACCGGATTGCAAGCCTTTTCACATTCCTTTAGAGACAGTTCTGGTCCAGCAGCAATGTGGCTTTGTGCTTTTGAAGTTTTCCATATTATATTTAAACTTCAGTGATAGTGGAGATGATGTAAACTCCCCAACATTCAAATCGTTTGAGGAAAAGGTTGAAAACTTAAAGGCAAGTAGAGAAATGAACAGGGTCTTTTGTGTTGTCTTGTTTGGTGCCTTAACTTTCTTTGGTTCTAAAGTAGGAGGAACCAAGCCTGCTGGTGGTGATTTTGGAGAAGTCTTGAATTCGACTGCAAACGCTAGTTCCACCACCACGGAGCCTCTTCCAGAACAGACACAGGAGAGCCTGTGA

Related Sequences

bmy_19963T0 Protein

Length: 287 aa      View alignments
>bmy_19963T0
MRCGSNLIGFILAGAVEEPKGEFYLAFIPYRLFFFFLNLHQGLLRTDPVPEEGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLTEIKRKLGINSLQELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKYSFLITPDCKPFHIPLETVLVQQQCGFVLLKFSILYLNFSDSGDDVNSPTFKSFEEKVENLKASREMNRVFCVVLFGALTFFGSKVGGTKPAGGDFGEVLNSTANASSTTTEPLPEQTQESL*