Part of scaffold_2264 (Scaffold)

For more information consult the page for scaffold_2264 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CAPN13 ENSTTRG00000000164 (Bottlenosed dolphin)

Gene Details

calpain 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000155, Bottlenosed dolphin)

Protein Percentage 81.29%
cDNA percentage 87.64%
Ka/Ks Ratio 0.76455 (Ka = 0.1038, Ks = 0.1358)

BT.29297 ENSBTAG00000008946 (Cow)

Gene Details

calpain-13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041966, Cow)

Protein Percentage 74.75%
cDNA percentage 81.4%
Ka/Ks Ratio 0.34082 (Ka = 0.1605, Ks = 0.4708)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1023 bp    Location:240666..182000   Strand:-
>bmy_19991
ATGAACCAGAATGGGGCTCTGGCCTTTGGGATGTCATGTCAAGATTTCYGAGATAACTTCTTCTGCCTATTTATATGTAACCAAGTTCCAATCAGCCTGGACCATGGAAACACACTCCTTGAAAGATGGTCCCAACTGATGTTTAAGAACCACTTAATTCCAGGAAATGTGGAAGGTAGTTATGACATTGGACCCCAGAGGGACATGCAGTACATCTTCTCTCTACCAGAAAGCATGGAAAACAACAATGTCATCGTGTCCTTCAATTTTGTCATGCCACAAAATTTAAAGGCAAAAGACAGGACATTTCCACTGAAGTCCGAGGTGTTCAAGTTTGGGTTCCTGAACCTGCCTTTCTTCTCTTCCCTCAGATCGACTATCAGTTCCAGCATTTCCGAGAGAGAGAGATTGCCGCCCACCTTTTTTTCCAAATTCAGAATTGCTGAGAAGGACATCGTTTCTGAAACCACATGCAACCTTACAGAGTGCTTCAGCCTGAGCCCTGGGACCTATGTGGTGGTCATCTCTGCAGGCAGAGAAGCAGTTGAGTTCTTGCTCCGAATCTTCCTAAAGATGCCAGACAGTGACAGGAACCTGGACGATAATCTCAACCTCAGACCACTACAGGTGGACACTGGGGCTCACACGGGCTTCTTGCTTTTTCTCCCATGTCAGAGTGTTTTCCAGAACTCCCGGAAGAACTCTGGAGTTTTCCCGAGCTTGGATTTGTGGAAGGCCATAAAGGACACAGACTTCCTTGCAGGGATCTCCGTCACCAATGAGCGGCTGGATGTCATGCGACTCCGCTATAGCGACAGCACAGGCAGGGTCAGCTTCCCCAGCCTGGTCTGCGTCCTGATGCGGCTTGAAGCCGTGACAAAAGCGTTCCAGAACCTCTCCAAGGATGGAAAAGGACTCTACCTGACAGAAATGGAGACACGATATGGACCGTTCCACGACCATTCAGACTCCACCCAGAGCGTGGAGTGGGGTGCGGGGCTCCGGATCTGCTCTGGGTATTAA

Related Sequences

bmy_19991T0 Protein

Length: 341 aa      View alignments
>bmy_19991T0
MNQNGALAFGMSCQDFXDNFFCLFICNQVPISLDHGNTLLERWSQLMFKNHLIPGNVEGSYDIGPQRDMQYIFSLPESMENNNVIVSFNFVMPQNLKAKDRTFPLKSEVFKFGFLNLPFFSSLRSTISSSISERERLPPTFFSKFRIAEKDIVSETTCNLTECFSLSPGTYVVVISAGREAVEFLLRIFLKMPDSDRNLDDNLNLRPLQVDTGAHTGFLLFLPCQSVFQNSRKNSGVFPSLDLWKAIKDTDFLAGISVTNERLDVMRLRYSDSTGRVSFPSLVCVLMRLEAVTKAFQNLSKDGKGLYLTEMETRYGPFHDHSDSTQSVEWGAGLRICSGY*