Sequence details bmy_19994 (Coding sequence)

Part of scaffold_2287 (Scaffold)

For more information consult the page for scaffold_2287 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

COPB2 ENSTTRG00000005367 (Bottlenosed dolphin)

Gene Details

coatomer protein complex, subunit beta 2 (beta prime)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005066, Bottlenosed dolphin)

Protein Percentage 99.54%
cDNA percentage 98.97%
Ka/Ks Ratio 0.06314 (Ka = 0.0021, Ks = 0.0336)

COPB2 ENSBTAG00000014843 (Cow)

Gene Details

coatomer subunit beta'

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019767, Cow)

Protein Percentage 99.02%
cDNA percentage 95.0%
Ka/Ks Ratio 0.02891 (Ka = 0.0059, Ks = 0.2039)

COPB2  (Minke Whale)

Gene Details

coatomer protein complex, subunit beta 2 (beta prime)

External Links

Gene match (Identifier: BACU012748, Minke Whale)

Protein Percentage 99.54%
cDNA percentage 99.16%
Ka/Ks Ratio 0.086 (Ka = 0.0022, Ks = 0.0251)

Additional orthologs identified in other species via the OPTIC pipeline.

COPB2 (Human)   Copb2 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 2634 bp    Location:136545..93024   Strand:-
Raw sequence 
>bmy_19994
ATGTTGGCGAGTCTTTACAATGGCAGTGTGTGCGTTTGGAATCATGAAACACAGACACTGGTGAAAACATTTGAAGTATGTGATCTTCCTGTTCGAGCTGCCAAGTTTGTTGCGAGGAAGAATTGGGCTGTGACGGGGGCGGATGACATGCAGATTAGAGTGTTCAACTACAACACTCTGGAGAGAGTTCATATGTTTGAAGCTCATTCAGACTACATTCGCTGTATTGCTGTTCATCCAACCCAGCCTTTCATTCTAACTAGCAGCGATGACATGCTTATTAAACTCTGGGACTGGGATAAAAAATGGTCTTGCTCACAAGTGTTTGAAGGACACACCCATTATGTTATGCAGATTGTGATCAACCCCAAAGATAACAATCAGTTTGCCAGCGCTTCTTTGGACAGGACTATCAAGGTGTGGCAGCTGGGCTCCTCGTCACCAAACTTCACTCTGGAGGGACATGAAAAAGGTGTGAACTGCATTGATTACTACAGTGGGGGCGACAAACCATACCTCATTTCAGGTGCAGATGACCGTCTTGTGAAAATATGGGACTATCAGAATAAAACATGTGTACAGACACTGGAGGGACACGCCCAAAATGTGTCTTGTGCCAGTTTTCATCCTGAGCTGCCAATTATAATCACAGGTTCAGAAGATGGAACCGTGCGTATTTGGCATTCAAGCACCTATCGCCTTGAGAGCACATTGAATTATGGCATGGAGAGGGTATGGTGTGTGGCCAGCCTGCGAGGGTCCAACAACGTTGCTTTGGGCTATGATGAAGGGAGCATCATTGTGAAGCTTGGTCGGGAGGAACCTGCCATGTCCATGGATGCCAATGGAAAGATAATTTGGGCCAAACATTCAGAAGTCCAGCAGGCCAACCTAAAAGCAATGGGAGATGCTGAAATTAAAGATGGAGAAAGATTGCCACTGGCAGTAAAGGATATGGGCAGTTGTGAAATATACCCTCAGACTATCCAGCACAATCCTAATGGGCGGTTTGTTGTGGTGTGTGGTGATGGCGAATATATCATCTACACAGCAATGGCACTGAGAAACAAGAGCTTTGGGTCTGCCCAGGAGTTTGCGTGGGCCCACGATTCTTCAGAATATGCAATAAGAGAGAGCAACAGTGTTGTAAAGATATTTAAGAACTTTAAGGAAAAAAAATCATTTAAACCAGATTTTGGAGCTGAAAGTATCTATGGAGGCTTCTTACTGGGAGTCAGATCTGTAAATGGCTTAGCTTTCTATGACTGGGACAATACAGAACTCATACGCAGAATTGAAATTCAGCCCAAACACATTTTCTGGTCTGACTCTGGAGAGCTAGTCTGTATTGCCACTGAAGAGTCATTTTTTATTCTTAAATATCTGTCGGAAAAAGTTTTGGCTGCACAGGAAACACATGAGGGAGTTACTGAAGATGGCGTTGAAGATGGCTTTGAAGTTCTTGGTGAGATTCAGGAAATTGTGAAAACAGGGCTGTGGGTAGGCGACTGCTTCATTTACACAAGTTCTGTGAACAGATTAAATTATTATGTCGGAGGAGAAATAGTCACCATTGCTCACTTGGACAGGACAATGTATCTCCTGGGCTATATTCCTAAAGACAACAGGCTTTATCTGGGGGATAAGGAACTCAACATCGTTAGCTACTCCCTGCTGGTTTCAGTGCTGGAATACCAGACAGCTGTCATGCGGAGAGACTTCAGCATGGCTGATAAGGTCCTTCCGACCATTCCGAAAGAGCAGAGGACCAGAGTTGCTCACTTTTTGGAAAAGCAGGGCTTCAAGCAGCAAGCTCTTACGGTATCCACAGACCCTGAGCATCGCTTTGAACTTGCTCTTCAGCTTGGAGAACTAAAAATTGCGTACCAATTAGCAGTGGAAGCAGAGTCAGAACAGAAGTGGAAACAACTTGCTGAACTTGCCATTAGTAAATGCCAGTTTGGCCTAGCCCAGGAGTGCCTCCACCATGCACAGGATTATGGGGGTCTGTTGCTTTTGGCCACTGCCTCTGGAAATGCTACTATGGTGAACAAGCTAGCAGAGGGTGCGGAGAGAGACGGCAAAAATAATGTGGCATTCATGAGCTACTTTTTACAGGGCAAGCTTGATGCTTGCCTGGAGCTCTTGATTAGAACTGGACGACTGCCAGAAGCTGCCTTCCTGGCACGGACTTACTTACCCAGTCAGGTTTCAAGGGTGGTGAAACTCTGGAGAGAAAATCTCTCAAAAGTCAATCAGAAAGCAGCAGAATCCCTTGCTGATCCAACAGAATATGAAAACCTTTTTCCTGGATTAAAAGAAGCCTTCGTTGTAGAAGAATGGGTGAAGGAAACACATGCTGACCTGTGGCCGGCCAAACAATACCCACTTGTCACGCCAAATGAAGAAAGAAATGTTATGGAAGAGGCAAAAGGCTTGCAGCCCTCAAGATCTGCATCTCAGCAGGAACTTGATGGGAAACCTGCTTCTCCTACTCCTGTTATTGTGGTCCCCCCCACAGACAACAAAGAGGAAAAGAGTTTACTTGAACTGGAAGTAGATTTGGATAATTTGGAATTAGAAGATATTGACACAACAGATATCAACCTGGATGAAGATATTTTGGATGACTGA

Related Sequences

bmy_19994T0 Protein

Length: 878 aa      View alignments
>bmy_19994T0
MLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWAVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHTHYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYLISGADDRLVKIWDYQNKTCVQTLEGHAQNVSCASFHPELPIIITGSEDGTVRIWHSSTYRLESTLNYGMERVWCVASLRGSNNVALGYDEGSIIVKLGREEPAMSMDANGKIIWAKHSEVQQANLKAMGDAEIKDGERLPLAVKDMGSCEIYPQTIQHNPNGRFVVVCGDGEYIIYTAMALRNKSFGSAQEFAWAHDSSEYAIRESNSVVKIFKNFKEKKSFKPDFGAESIYGGFLLGVRSVNGLAFYDWDNTELIRRIEIQPKHIFWSDSGELVCIATEESFFILKYLSEKVLAAQETHEGVTEDGVEDGFEVLGEIQEIVKTGLWVGDCFIYTSSVNRLNYYVGGEIVTIAHLDRTMYLLGYIPKDNRLYLGDKELNIVSYSLLVSVLEYQTAVMRRDFSMADKVLPTIPKEQRTRVAHFLEKQGFKQQALTVSTDPEHRFELALQLGELKIAYQLAVEAESEQKWKQLAELAISKCQFGLAQECLHHAQDYGGLLLLATASGNATMVNKLAEGAERDGKNNVAFMSYFLQGKLDACLELLIRTGRLPEAAFLARTYLPSQVSRVVKLWRENLSKVNQKAAESLADPTEYENLFPGLKEAFVVEEWVKETHADLWPAKQYPLVTPNEERNVMEEAKGLQPSRSASQQELDGKPASPTPVIVVPPTDNKEEKSLLELEVDLDNLELEDIDTTDINLDEDILDD*