Sequence details bmy_19997 (Coding sequence)

Part of scaffold_2287 (Scaffold)

For more information consult the page for scaffold_2287 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RBP1 ENSTTRG00000004839 (Bottlenosed dolphin)

Gene Details

retinol binding protein 1, cellular

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004557, Bottlenosed dolphin)

Protein Percentage 56.45%
cDNA percentage 66.4%
Ka/Ks Ratio 0.22091 (Ka = 0.3773, Ks = 1.7078)

RBP1 ENSBTAG00000020028 (Cow)

Gene Details

Retinol-binding protein 1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000015936, Cow)

Protein Percentage 55.65%
cDNA percentage 65.86%
Ka/Ks Ratio 0.24291 (Ka = 0.3917, Ks = 1.6126)

RBP1  (Minke Whale)

Gene Details

retinol binding protein 1, cellular

External Links

Gene match (Identifier: BACU012752, Minke Whale)

Protein Percentage 65.52%
cDNA percentage 68.97%
Ka/Ks Ratio 0.20567 (Ka = 0.232, Ks = 1.1281)

Genome Location

Sequence Coding sequence

Length: 510 bp    Location:269944..266610   Strand:-
Raw sequence 
>bmy_19997
ATGGAGCAGGGGACCCCGATGGTTTTCTTGCGGGGGGCGGATGTCAATGTGGCCTTGCGCAAAATCGCCAACTTGCTGAAGCCAGACAAAGAGATCGTGCAGAACGGCGACCACATGATCATCCGCACGCTGAGCACTTTTAGGAACTACATCATGGACTTCCAGGTTGGGGAGGAGTTTGAGGAGGATCTGACGGGCATAGACGACCGCAAGTGCATGCCATTAAGCATTAGGACAGTGGTAGGTGAACAGATCAGGGAGCCCAGCAGTTGGGCAAACTCGATGACATTGTATGAGGACTCGTGGTCACCTTTGCTGTCCCAGGACTCAGGGCGGCCCCCTCCCAAGTATTATAGATGGCACGCACTAACCGTGCTGTTGCCTGTTGGGAGGATGGACGGCCCTCTGCTCTGGCCTCCCCTTGGCCCTTGCGCTGCAGAGAAGCCCTTCTCCCCTGCTGCCCAGCTGGAGGGGGGCCACGGGGAAGAGCACGGCTGGGGGAGAGCATAG

Related Sequences

bmy_19997T0 Protein

Length: 170 aa      View alignments
>bmy_19997T0
MEQGTPMVFLRGADVNVALRKIANLLKPDKEIVQNGDHMIIRTLSTFRNYIMDFQVGEEFEEDLTGIDDRKCMPLSIRTVVGEQIREPSSWANSMTLYEDSWSPLLSQDSGRPPPKYYRWHALTVLLPVGRMDGPLLWPPLGPCAAEKPFSPAAQLEGGHGEEHGWGRA*