Part of scaffold_2272 (Scaffold)

For more information consult the page for scaffold_2272 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMURF1 ENSTTRG00000002994 (Bottlenosed dolphin)

Gene Details

SMAD specific E3 ubiquitin protein ligase 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000002810, Bottlenosed dolphin)

Protein Percentage 97.05%
cDNA percentage 96.21%
Ka/Ks Ratio 0.15209 (Ka = 0.0127, Ks = 0.0837)

SMURF1 ENSBTAG00000007118 (Cow)

Gene Details

E3 ubiquitin-protein ligase

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000041274, Cow)

Protein Percentage 89.01%
cDNA percentage 85.65%
Ka/Ks Ratio 0.14163 (Ka = 0.077, Ks = 0.5435)

SMURF1  (Minke Whale)

Gene Details

SMAD specific E3 ubiquitin protein ligase 1

External Links

Gene match (Identifier: BACU012115, Minke Whale)

Protein Percentage 99.31%
cDNA percentage 99.03%
Ka/Ks Ratio 0.12346 (Ka = 0.0032, Ks = 0.026)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2457 bp    Location:193351..169255   Strand:-
>bmy_20018
ATGACCTTGAAGCTCGCTTTACTTGCGGGACTGGGTTCTGTCTTCTCATCCAGTGTGGCTGTCCCCTCTCCTCTAGGACTCCCTGACCCTTTTGCAAAGATCGTTGTGGATGGATCTGGGCAGTGCCACTCAACGGACACTGTGAAGAACACGTTGGACCCCAAGTGGAACCAGCACTACGATCTATACGTTGGGAAAACGGATTCTATAACCATCAGCGTGTGGAACCACAAGAAAATTCACAAGAAGCAGGGAGCTGGCTTCCTGGGATGCGTGCGGCTGCTCTCCAATGCCATCAGCAGATTAAAAGATACTGGATACCAGCGTTTGGATCTATGCAAACTAAACCCCTCAGATACTGATGCAGTTCGTGGCCAAATAGTGGGTACCTTGGAGGAAGTGAATATTGTGTTCTGTTATTTTGATGAAGAGCACAGACAACACAGCATCTCTTTCTGCTCCACGTTTCCAAGGAGTGTTCCAAGTGTCAGTTTACAGACACGAGACAGAATAGGCACTGGAGGGTCCGTGGTAGACTGCAGAGGGCTGTTAGAAAATGAAGGAACTGCGTATGAAGACTCAGGGCCTGGAAGGCCACTCAGCTGCTTCATGGAGGAACCAGCCCCTTACACGGATGGCACTGGGGCTGCTGCTGGCGGGGGTGGCTGCAGGTCTGTGGAATCCCCGAGTCAGGATCAAAGACTTCAGGCCCAGCGACTGCGAAGTCCTGAGGTCCGAGGGTCACTCCAGACGCCGCAGAACCGACCTCACGGCCACCAGTCCCCGGAACTGCCCGAAGGCTACGAACAGAGAACAACGGTGCAGGGGCAGGTTTACTTCCTGCACACGCAGACTGGAGTTAGCACGTGGCACGACCCCAGGATACCCAGAGACCTTAACAGCGTGAACTGTGATGAACTTGGRCCGCTGCCACCCGGCTGGGAAGTCCGAAGTACCGTTTCCGGGAGAATATATTTTGTAGATCATAATAACCGAACAACCCAGTTTACAGACCCGAGGTTACACCACATCATGAAAACACTGCTTGCTGGAGCCTCTTCCCGGGCCATCGTTCCCGGGGGCCGTGGACCTGGCTATGACCTTGGATCCCACACTCCACGTTCCAGGTTTGCTTCGCTTCGTGTGGGCACACTGCTGGCAGCAACCTTGGCCGCTGCTCTTGGGGCGACCTCGATGCTTCTGTTCTTCTCCAGTCACCAGTGCCAACTAAAGGAGCCCAGCCAGCCGCTGCCACTGCCCAGTGAGGGCTCCGTGGAAGACGAGGAGCTTCCCGCCCAGAGATATGAGAGAGATTTAGTCCAGAAACTGAAGGTCCTCAGACACGAACTCTCACTTCAGCAACCCCAAGCTGGTCACTGCCGCATCGAAGTATCCAGAGAGGAAATATTTGAGGAGTCTTATCGCCAGATAATGAAGATGCGACCAAAAGACTTGAAAAAGCGACTGATGGTGAAATTCCGAGGAGAAGAAGGTTTGGACTACGGCGGGGTGGCGAGGGAGTGGCTTTACTTATTGTGCCATGAGATGTTGAATCCATATTATGGACTCTTCCAATATTCCACGGACAACATTTACATGTTGCAAATCAATCCCGATTCTTCCATCAACCCTGACCACTTGTCTTATTTCCATTTTGTGGGTCGGATCATGGGTCTGGCTGTGTTCCATGGACACTACATAAACGGGGGTTTCACAGTTCCCTTTTACAAGCAGCTACTGGGGAAACCCATCCAGCTTTCTGACTTGGAATCGGTGGACCCAGAACTTCATAAGAGCTTAGTGTGGATTCTAGAGAACGACATCACCCCCGTGCTGGACCACACGTTCTGTGTGGAGCACAACGCTTTCGGGAGGATTCTTCAGCATGAACTGAAACCCAACGGCAGGAATGTCCCTGTCACAGAGGAGAACAAGAGGGAATACGTCCGGTTATATGTAAATTGGAGGTTTATGAGGGGGATCGAGGCCCAGTTCCTGGCTCTTCAGAAGGGGTTTAATGAACTCATCCCTCAACACTTACTGAAGCCTTTCGACCAGAAGGAGCTGGAGCTGATCATCGGCGGCCTGGACAAGATCGACCTGGACGACTGGAAGTCCAACACACGGCTGAAGCACTGCGGGGCCGACAGCAACGTGGTCCGGTGGTTTTGGCAGGCGGTGGAGACCTTCGACGAGGAGAGGAGGGCCCGGCTGCTGCAGTTCGTGACGGGCTCCACGCGGGTCCCCCTCCAGGGCTTCAAGGCGCTGCAAGGCTCTACAGGCGCTGCAGGGCCGCGGCTCTTCACCATCCACCTGATCGACGCGAACACAGACAACCTGCCCAAGGCCCACACCTGCTTTAACCGGATCGACATTCCACCCTACGAGTCATACGAGAAGCTCTATGAGAAGCTGCTGACAGCAGTGGAGGAGACCTGTGGGTTTGCTGTGGAGTGA

Related Sequences

bmy_20018T0 Protein

Length: 819 aa      View alignments
>bmy_20018T0
MTLKLALLAGLGSVFSSSVAVPSPLGLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVGTLEEVNIVFCYFDEEHRQHSISFCSTFPRSVPSVSLQTRDRIGTGGSVVDCRGLLENEGTAYEDSGPGRPLSCFMEEPAPYTDGTGAAAGGGGCRSVESPSQDQRLQAQRLRSPEVRGSLQTPQNRPHGHQSPELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMKTLLAGASSRAIVPGGRGPGYDLGSHTPRSRFASLRVGTLLAATLAAALGATSMLLFFSSHQCQLKEPSQPLPLPSEGSVEDEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKREYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLDDWKSNTRLKHCGADSNVVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGSTGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE*