Sequence detailsbmy_20058 (Coding sequence)

Part of scaffold_2307 (SequenceType object (1))

For more information consult the page for scaffold_2307 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CLK1ENSTTRG00000011787 (Bottlenosed dolphin)

Gene Details

CDC-like kinase 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011178, Bottlenosed dolphin)

Protein Percentage 92.78%
cDNA percentage 92.85%
Ka/Ks Ratio 0.12438 (Ka = 0.0065, Ks = 0.0522)

CLK1ENSBTAG00000005408 (Cow)

Gene Details

dual specificity protein kinase CLK1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007115, Cow)

Protein Percentage 95.88%
cDNA percentage 95.74%
Ka/Ks Ratio 0.15493 (Ka = 0.0204, Ks = 0.1316)

CLK1 (Minke Whale)

Gene Details

CDC-like kinase 1

External Links

Gene match (Identifier: BACU014122, Minke Whale)

Protein Percentage 99.18%
cDNA percentage 99.38%
Ka/Ks Ratio 0.23347 (Ka = 0.0036, Ks = 0.0154)

Additional orthologs identified in other species via the OPTIC pipeline.

CLK1 (Human)   Clk1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1638 bp    Location:187422..178450   Strand:-
Raw sequence 
>bmy_20058
CGTGCACGCCCCGCCCGGAGGCGGAGGCCCGCTTGCAGCGTCATCGTGTTTTCCAGGAGAGTCCTGACGCGGTGGCTGTCAGCTCCATTTTGCTGCCGGAGTTCGCAGCAGGCAGCTGCGTTTTCTCCGTGGTCGCGTTGCAAGCATTGTCTCCTTAGGCTTGGACTCTTTTCCAGGACGATGAGGCACTCAAAGAGAACTTATTGTCCTGATTGGGATGAAAAAGATTGGGATTATGGAAAATGGAGGAGCAGCAGTGACAGTCATAAAAGAAGGAGGAGATCGCATAGCAGTGCGCGGGAGAACAAGCGCTGCAGATATAATTACTCTAAAACATCTGATAGCTATTATCTGGAAAGCAGATCCATAAATGGGAAGGATTATCATAGTCGACGATACATTGATGAATACAGAAATGACTACAATCAAGGATGTGAACCTGGACATCATCATAGAGATAATGAAAGCAGATATCAGAACCATAGTAGCAAGTCCTCTGGTAGAAGTGGAAGAAGTAGTTATAAAAGCAAACACAGAATTCACCACAGCACTTCATATCATCGTTCACATGGGAAGAGTCACCGAAGGAAAAGAACCAGGAGTGTAGAGGATGATGAGGAGGGTCACCTGATCTGTCAGAGTGGAGACGTACTAAGTGCAAGATATGAAATTGTTGATACTTTAGGTGAAGGAGCTTTTGGGAAAGTCATGGAGTGCATTGATCATAAAGCGGGAGGTAGACATGTAGCAGTAAAAATAGTTAAAAATGTGGATAGATATTGTGAAGCTGCTCGCTCAGAAATACAAGTTCTGGAACACTTAAATACAACAGACCCCAGCAGAACATTCCGCTGTGTCCAGATGTTGGAGTGGTTTGAACATCATGGTCATGTCTGCATTGTGTTTGAACTACTAGGACTTAGTACTTATGACTTTATTAAGGAAAATGGTTTTCTGCCCTTTCGACTGGATCATATCAGGAAGATGGCATATCAGATATGCAAGTCTGTGAATTTTCTGCACAGTAATAAGTTGACTCACACAGACTTAAAGCCTGAAAACATCTTATTTGTACAATCTGACTACACAGAGGCATATAATCCCAAAATGAAACGTGATGAACGTACTTTAATAAATCCAGATGTTAAAGTTGTAGACTTTGGAAGTGCAACATATGATGATGAACATCACAGTACGTTGGTATCTACAAGACACTATAGGGCACCTGAAGTTATTTTAGCCCTAGGATGGTCCCAACCATGTGATGTCTGGAGTATAGGATGTATTCTTATTGAATATTACCTTGGGTTTACAGTATTTCCAACACACGATAGTAAGGAACATTTGGCAATGATGGAAAGGATTCTTGGACCTTTGCCAAAACATATGATACAGAAAACCAGGAAACGTAAATATTTCCATCATGATCGATTAGACTGGGATGAACATAGTTCTGCTGGGAGATATGTTTCAAGGCGCTGTAAACCTCTGAAGGAATTTATGCTTTCTCAAGATGCTGAACATGAGCTTCTCTTTGACCTCATTCAGAAAATGTTGGAGTATGATCCAGCTAAAAGGATTACTCTTAAAGAAGCCTTAAAGCATCCTTTCTTTTACCCCCTTAAAAAAAGTGTATAA

Related Sequences

bmy_20058T0 SequenceType object (3)

Length: 546 aa      View alignments
>bmy_20058T0
RARPARRRRPACSVIVFSRRVLTRWLSAPFCCRSSQQAAAFSPWSRCKHCLLRLGLFSRTMRHSKRTYCPDWDEKDWDYGKWRSSSDSHKRRRRSHSSARENKRCRYNYSKTSDSYYLESRSINGKDYHSRRYIDEYRNDYNQGCEPGHHHRDNESRYQNHSSKSSGRSGRSSYKSKHRIHHSTSYHRSHGKSHRRKRTRSVEDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVMECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPSRTFRCVQMLEWFEHHGHVCIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKMKRDERTLINPDVKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRRCKPLKEFMLSQDAEHELLFDLIQKMLEYDPAKRITLKEALKHPFFYPLKKSV*