Sequence detailsbmy_20059 (Coding sequence)

Part of scaffold_2307 (SequenceType object (1))

For more information consult the page for scaffold_2307 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PPIL3ENSTTRG00000011789 (Bottlenosed dolphin)

Gene Details

peptidylprolyl isomerase (cyclophilin)-like 3

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000011180, Bottlenosed dolphin)

Protein Percentage 98.45%
cDNA percentage 98.45%
Ka/Ks Ratio 0.24139 (Ka = 0.0072, Ks = 0.03)

PPIL3ENSBTAG00000005416 (Cow)

Gene Details

peptidyl-prolyl cis-trans isomerase-like 3

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000007126, Cow)

Protein Percentage 95.0%
cDNA percentage 93.33%
Ka/Ks Ratio 0.16418 (Ka = 0.0325, Ks = 0.198)

Additional orthologs identified in other species via the OPTIC pipeline.

PPIL3 (Human)   Ppil3 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 486 bp    Location:209169..199704   Strand:-
Raw sequence 
>bmy_20059
ATGTCAGTGACRCTGCATACAGATGTAGGTGATATTAAAATAGAAGTCTTCTGTGAGAGGACACCCAGAACATGTGAAAATTTCTTGGCTCTTTGTGCCAGTAATTACTACAATGGCTGTATATTTCATAGAAATATCAAGGGTTTCATGGTTCAAACAGGAGATCCGACAGGTACTGGAAGAGGAGGTAGCAGTATCTGGGGCAAGAAATTTGAAGATGAATACAGTGAATATCTTAAGCACAGCGTTAGAGGTGTTGTATCTATGGCTAATAATGGCCCAAACACCAATGGATCTCAGTTCTTCATCACCTATGGGAAGCAGCCACATCTGGACATGAAATACACAGTATTTGGAAAGGTAATAGATGGTCTGGAGACTCTAGATGAACTGGAGAAGTTACCAGTAAATGAGAAGACATATCGACCTCTTAATGATGTACACATTAAGGACATAACTATTCATGCCAACCCATTTGCTCAGTAG

Related Sequences

bmy_20059T0 SequenceType object (3)

Length: 162 aa      View alignments
>bmy_20059T0
MSVTLHTDVGDIKIEVFCERTPRTCENFLALCASNYYNGCIFHRNIKGFMVQTGDPTGTGRGGSSIWGKKFEDEYSEYLKHSVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLPVNEKTYRPLNDVHIKDITIHANPFAQ*