Sequence detailsbmy_20079 (Coding sequence)

Part of scaffold_2309 (SequenceType object (1))

For more information consult the page for scaffold_2309 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000007815 (Bottlenosed dolphin)

Gene Details

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007392, Bottlenosed dolphin)

Protein Percentage 60.03%
cDNA percentage 67.19%
Ka/Ks Ratio 0.2463 (Ka = 0.3455, Ks = 1.4027)

FLCNENSBTAG00000008010 (Cow)

Gene Details

Folliculin

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000010532, Cow)

Protein Percentage 71.24%
cDNA percentage 73.4%
Ka/Ks Ratio 0.17822 (Ka = 0.2224, Ks = 1.2478)

FLCN (Minke Whale)

Gene Details

folliculin

External Links

Gene match (Identifier: BACU005278, Minke Whale)

Protein Percentage 38.75%
cDNA percentage 50.29%
Ka/Ks Ratio 0.039 (Ka = 0.6717, Ks = 17.2236)

Additional orthologs identified in other species via the OPTIC pipeline.

FLCN (Human)   Flcn (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 2469 bp    Location:244068..226844   Strand:-
Raw sequence 
>bmy_20079
GGCGCAGGGGGTCGGGCAGCCGCTCCAGCGTCCCGCCTGACTTTGGAGCTGCTGGGCTCGTGCTGTCTTCCCGGGCTGCGAGTCTGGCGGGGATCCGCGCGCCTCGCGGGGTGGGGGCGTCGGACGGCCCGCTCCCCCTCCACGGCCCGGGCGTGGTACCGCCCGGCCGAGTCACGCGCGCCGAGGCGGGCGCGGCGGATCTGTGAGGGTACACGCTCTGCAGACATTCAGACCCCGTCACGGCCCCTCCTCAGCCCCCGTGGCGCCCTCTGTTCCTTCGGCTGTCACCTGGGAGCCCTGTCGTCGGAAACTACATCCCACCTCCTCCGGTGTTTCTCTGCCCTGGACCCCTGTCCTTGTGTCCCTAACGCGGTCACCGCACGAGAGGAAGCGGTGTGCCACGCGTCCCTGCCCGCCTGGAAGCAGGCCTGGCCCAGTCTCCAGGGCACCATGAATGCCATCGTTGCGCTCTGTCACTTCTGCGAGCTCCACGGCCCCCGCACGCTCTTCTGCACAGAGGTCCTGCACGCCCCGCTCCCGCAAGGGGCAGGGAGTGGGGACGGCCTTGGCCAGGGCGAGCAGGCTGAGGAAGAGGAGGGCGGCATCCAGATGAGCAGCCGCGTCCGCGCCCACAGCCCGGCCGAAGGGGCCAGCGCTGAGTCCAGCAGCCCGGGGCCCAAGAAGTCGGACATGTGCGAGGGCTGCCGGTCACTTGCTGCAGGGCATCCCGGGTACATCAGCCATGACAAGGAGACCTCGATCAAGTACGTCAGTCACCAGCACCCCAACCACCCCCAGCTCTTCAGCATTGTCCGCCAGGCCTGTGTGCGGAGCCTGAGCTGTGAGGTGTGCCCCGGCCGCGAGGGCCCCATCTTTTTTGGGGACGAGCAGCATGGCTTTGTGTTCAGCCACACGTTCTTCATCAAGGACAGCCTGGCCCGGGGCTTCCAGCGCTGGTACAGCATCATCGCCATCATGATGGACCGCATCTACCTCATCAACTCCTGGCCCTTCCTGCTGGGCAAGATCCGTGGGATCATCGACGAGCTCCAGGGCAAGGCGCTCAAGGTGTTTGAGGCGGAGCAGTTTGGGTGCCCGCAGCGTGCTCAGAGGATGAACACTGCTTTCACACCGTTCCTGCACCAAAGGAACGGCAACGCTGCCCGCTCGCTGACGTCCTTGACGAACGATGACAGCTTGTGGGCGTGCCTGCACACCTCCTTCGCCTGGCTCCTGAAGGCGTGCGGCAGCCGGCTGACCGAGAAGCTCCTGGAAGGCGCGCCCACTGAGGATACGTTGGTCCAGATGGAGCAGCTTGCGGTTGGACCCGAGGTTTTCATCAGGGTGGTGGTTCCCAAGCCTCCTGGTAACTGGGCCTCCCTCCCCAGGTTTGCAATCAGATCTCCACATCTGGGTGTTCTAAGTAACTGCCCAGGGGAGTCTGGGAGTCTGCTTTTCTTTGGAGATGATTGGATTTTCAGTGACGTAGGTCCAGGACCTCAAACGTGGGGCGGGGTGAACGAGGCTCACGATGCCTCTCGTGTGTCCTGTGTTACAACGTGCTGCTTTTTGCAAGTGATTGGCCTTAACAAGCTGGCGCTGTTGCGAGCTGGTCCCTGCCGTCCGGTGACTCGCGTCCGAGCAGGCTGCCCTGCGAAGGGGAGGGCGGGCTGGCTCGTCAAGGGCAGGGCTCGCTCGGAGGAGACAGAAGCGCGGCCCGCTTTCACGCCCTCACGGTGCGGTCGGCCCGGAACCGTTTGTCACTTGGAAGAGGAATCAGAAAGCTGGGGCAACTCTGAGGCTGAAGAGGAGGAGAAAGCCCCTGTCTTGCCCGAGGGGGCCGAGGGGCGGGAGCTGACCAAGTGCCCAGCGGATTCGTCCTTGCTCTCAGACTGTGGAAACTGGCAGCCCCGAAAGCTCTCTGTCTTTAAATCCCTTCGGCACATGAGGCAGAATTGGAAACAACCTGAATGTACGACCCTAGGAATTGCATCCGAACAATGGCCCGTTGTTCGGACAGATGAGGAAGTCACAGCCCCTAGACTGAGAGACTCACAGCCCCAGAGGACGTGGTTAGAGGCTGGGGCTCCGGACGTGGATCCGCTCAGCGGGGCAGCCCTGGGCTGCCGGCATCGAGACCGAGCTCTTCCTCGAATTGGGGAAAAGATCTTGAAGTGTACAAGAGCTCTGGGGTCGGACCTTCAGGTCCTGGGTGCCCCATCTTTCCGCACACTGGCCTGGCACGTCCTCATGGGGAACCAGGTGATCTGGAAAAGTAGAGACGCAGACCTTGTCCATTCAGCCTTTGAAGTTCTTCGGACCATGCTGCCCGTGGGCTGTGTGCGCGTCATCCCTTACAGCAGCCAGTACGAGGAGGCCTACCGCTGCAACTTCCTGGGGCTCGGCCCCCACGTGCAGATCCCTCCCCACGTGCTGGCCTCAGGTGCGTGCCGCGTCGGTCTGGGCTGA

Related Sequences

bmy_20079T0 SequenceType object (3)

Length: 823 aa      View alignments
>bmy_20079T0
GAGGRAAAPASRLTLELLGSCCLPGLRVWRGSARLAGWGRRTARSPSTARAWYRPAESRAPRRARRICEGTRSADIQTPSRPLLSPRGALCSFGCHLGALSSETTSHLLRCFSALDPCPCVPNAVTAREEAVCHASLPAWKQAWPSLQGTMNAIVALCHFCELHGPRTLFCTEVLHAPLPQGAGSGDGLGQGEQAEEEEGGIQMSSRVRAHSPAEGASAESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPNHPQLFSIVRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIIAIMMDRIYLINSWPFLLGKIRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARSLTSLTNDDSLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEQLAVGPEVFIRVVVPKPPGNWASLPRFAIRSPHLGVLSNCPGESGSLLFFGDDWIFSDVGPGPQTWGGVNEAHDASRVSCVTTCCFLQVIGLNKLALLRAGPCRPVTRVRAGCPAKGRAGWLVKGRARSEETEARPAFTPSRCGRPGTVCHLEEESESWGNSEAEEEEKAPVLPEGAEGRELTKCPADSSLLSDCGNWQPRKLSVFKSLRHMRQNWKQPECTTLGIASEQWPVVRTDEEVTAPRLRDSQPQRTWLEAGAPDVDPLSGAALGCRHRDRALPRIGEKILKCTRALGSDLQVLGAPSFRTLAWHVLMGNQVIWKSRDADLVHSAFEVLRTMLPVGCVRVIPYSSQYEEAYRCNFLGLGPHVQIPPHVLASGACRVGLG*