Part of scaffold_2291 (Scaffold)

For more information consult the page for scaffold_2291 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SCN7A ENSTTRG00000003838 (Bottlenosed dolphin)

Gene Details

sodium channel, voltage-gated, type VII, alpha subunit

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000003616, Bottlenosed dolphin)

Protein Percentage 95.18%
cDNA percentage 96.79%
Ka/Ks Ratio 0.45423 (Ka = 0.0246, Ks = 0.0542)

SCN7A ENSBTAG00000019137 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000038254, Cow)

Protein Percentage 86.64%
cDNA percentage 91.41%
Ka/Ks Ratio 0.42123 (Ka = 0.0697, Ks = 0.1654)

SCN7A  (Minke Whale)

Gene Details

sodium channel, voltage-gated, type VII, alpha subunit

External Links

Gene match (Identifier: BACU010094, Minke Whale)

Protein Percentage 97.08%
cDNA percentage 97.92%
Ka/Ks Ratio 0.46069 (Ka = 0.0159, Ks = 0.0345)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3804 bp    Location:209159..272829   Strand:+
>bmy_20086
ATGAAACTGAAACGCTGCACAACAGAACTGGAAACCCACATTATATTCGAGTGTCCTGAAGGATATGTGTGTGTAAAAGCTGGTGTAAATCCTGATTATGGCTACACAAATTTTGACAGTTTTGGCTGGACCTTATTARCCCTATTTCGGTTAATGATGCAAGATTACCCTGAAGCACTTTATCACCAGATCCTTTATGCTTCTGGAAAGGTCTACATGATATTTTTTGTTGTGATAAGTTTTTGGTTTGCCTTTTATATGGCAAGTTTGTTCTTAGGCATACTTGCTATCTCCTGTGAAGAAGAAAAGCAGAGAGCTGCTGAAAAAGCTAAGAAGATTGAGCCGGAACTTCAGCAAGCTTTAACGGAACTTCAAGAAGGAAATAAAGCAGCAGAGACCAAGACTACAGAAATAGAAATGAAGAAAAGATCATCAACTTCTATGATTACTTCTTTGGATATGTTGGATGATACTACTATCAGACATAAAGAAGAACTTAGAAAATCCAGGAAGAGATGCCCATTTTGTTGGTATAGATTTGCTAAAACTTTCTTGATCTGGAATTGTTCTCCCTGTTGGTTAAAGTTGAAAGAGTTTGTCCATATGATCATAATGGACCCATTTACCGATCTTTTCCTTACCATATGCATAATTCTAAACGTACATTTTTTGGYCTTAGAACACTACCCAATGAGTTTAGAAACCAACAACATTCTCAACATTGAAAACCAGGTGTTTATTGGAATTTTCACAGCAGAAATGATTTTTAAAATAATTGCCATGCATCCATATGGGTATTTCCAATTACGTATTTTCAAATTGGGGAGATATTGGCCAACTTTCAAGATTTTGATGCTGACTCTTGGTAACTCCATRATGGCCCTGAAAGACTTGGTCCTGCTGTTGTTCACATTCATATTCTTTTCTGCTGTGCTTGGCCTGAAGCTGTTTGGTTCAAATTACAAAATATACGTCTGCAACATAGATGAAGACTGTCAACTTCCACGCTGGCACATGCATGATTTCCTCCACTCCTTCCTGAATGTATTCCGGATTCTCTGTGGAGAGTGGATAGAGACTTTATGGGATTGCTTTAAGGTAGCAGGCCAATTCAGTTGTATTCCTTTTTACATGATGGTGATTTTAGTTGGAAACTTATTGATACTTTACCTGTTTCTGGCATTGGTCAGCTCATTTAGTTCATACAAGGCTACAACAACTGAAGAGAATGATGAAGCAAAAAATCTCCAGCGTGCAATGGCAAGGATTAAAAAAGGAATAAATTATGTGCTTTCTAAAATATTATGCAAAAACCAAAATGTTCTAGAGGAAACAATGGACAATGTAAGTGATATATATGTTAAAGAGAATATTTCTGACCATACTCTCTCTGAATTGAGCAACACCCAAGATTTCCTCAAGGATAAGGAAAAAAGCAGTGGCACAGAGAAAAACACGATGACCGAAAATGGGAGTCAGTCACTTATCCCCAGTCCCAGTGTCTCAGAAACTGTACCGATTGCATCAGAAGAATCTGATATAGAAAATCTGGACAATAAGGAGATTCAGAGCAAGTCAGGTGATGGAAGCAGCAAAGAGAAGGTAAAGCAATCTAGCCCATCTGAATGCAGTACGGTTGATATTGCTATCTCTGAAGAAGAAGAAATGGTCTATGAACGTGGAAAGCCAAAGCGTCTTAAAAACGGTTATGGACGAAGATCTTCATCTGCTCAAATCAACAGAGACTCCAAGAAAGGAAAAATGTGGCAGAACATAAGGAAAACTTGCTGCAAAATAGTAGAAAACAGTTGTTTTAAGTGTTTCATTGGCCTTGTCACTCTGCTCAGCACAGGTGCTCTGGCTTTTGAAGATATATATATTGATCAGAGGAAGACTATTAAAATCTTATTAGAATATGCTGACATGATCTTCACTTACATCTTTATTCTGGAAATGCTTCTAAAGTGGATGGCATATGGTTTTAAAGCCTATTTCACTAATGGCTGGTACCAACTAGACTTCATGGTTGTTATTGTGTTTTGTATTAGCTTAATAGGCAAATCTCGGGAAGAACTAAAACCGCTTATTTCCATTAAATTCCTTCGAGCACTCAGAGTTCTATCTCAATTTGAAAGAATGAAGGTGGTAGTGAGAGCTTTGGTAAAAACAACTTTACCCACATTGAATGTGYTTCTGGTCTGCCTTATGATCTGGCTGGCTTTTAGCATCATAGGAGTACACTTATTTGCTGGCACATTCTATGAATGCATTGACCCAACAAGTGGAGAAAGGTTTCCTGTATCTGAAGTCATGAATAGGAGTCAATGTGAAAGCCTTGTGTTTAATGAATCCATGCCATGGGAGAATGCAAAACTGAACTTTGATAATGTTGGAATCAGTTTTCTTTCACTGCTTCAAGTAGCCACATTTAATGGATGGATCACTATTATGAATTCAGCAGTTGATTCTATTGGTGTAAGCTCAAATATCTTTATAACAGTAAAACAGGAGAAACAATACCATGCACTGAAGAAGCTGATGTGTGAAGTCTCTCAAAAACCAGTACCTCGCCCAGAAAACAAGTTCCAAGGATTTGTCTTTGACTTGGTAACAAATCAAGTTTTTAATGTCATCATCATGGTTCTTATATTTTTCCAAGCAATAACCATTATGATACAAAGTGATGAACAGAACCCAAAAATTGACATTGCTCTCTACTGGATTAACTCAGTTTTTGTTACACTGTACACTGGAGAATGTGTACTAAAGCTCGTCGTTTTCCATTACAACTATTTCACCAATGGATGGAACCTTTTTGATTTTATGGTGGTTGTTTTCTCTATTACAGGACTATTTCTGCCTCTGATGGTGGGATATTACCTTGTACCTCCTTCCCTTGTGCAACTGATACTTCTCTCACGGATCATCCACATCCTGCGTCCTGAGAAAGGACCAAAGGTGTTCCATGATCTGCTGCTTCCTTTGATGCTGTCCCTCCCCGCATTGTTGAACATCAGTCTCCTTATCTTCCTGATCATGTTTGTCTACGCCATCTTTGGAATGTACAATTTTGCCTATGTTAAAAAGGAAGCTGGAATTAATGACGTGTCCAACTTTGAAACCTTTGGCAGCAGTATGCTCTGTCTTTTCCAAGTTACAATATTTGCTGGTTGGGACGGGATGCTCAATGCAATTTTCAACAGTAAATGGTCTGACTGTGATCCTGATAAAATTAACCCTGGGTCTCAGGTTAGAGGAGACTGTGGTAACCCCTTTGTTGGGATTGTTTATTTTGTCAGTTACATCCTCATATCATGGCTGATCATTGTATGGAAGAGATTTGATCCTGATAGAACCCAGTATATAGACTCTAGCAAGCTTTCAGACTTCGCAGCTGCTCTTGATCCTCCTCTTCTAATGGCAAAACCAAACAAGGGCCAGATCGTTGCTATGGATCTTCCCATGGCTGTCGGGGACAGAATTCATTGCCTTGACATCTTACTCGCTTTAACAAAGCGAGTTATGAGTAAAGATGTGAGCATGGAGAAAGTTCTTTCAGAGATGGAATCCGGATTTACGTTAGCCAACCCTTTTAAGATCACATATGAGCCAATTACAACTACTCTGAAACGAAAACAAGAGGTAGTCTCAGCAACCATCATTCAGCGTGCTTATAAAAGTTACCGTTTGAGGCAAAATGACAAAAAAAAATCAGATATTCGTATGATAGATGGGGACATGGAAGTTCAGGCTATCAAAGAAGATTCATATTTTGACAAAACTGAGGGAAAGTCAACTATTTAA

Related Sequences

bmy_20086T0 Protein

Length: 1268 aa      View alignments
>bmy_20086T0
MKLKRCTTELETHIIFECPEGYVCVKAGVNPDYGYTNFDSFGWTLLXLFRLMMQDYPEALYHQILYASGKVYMIFFVVISFWFAFYMASLFLGILAISCEEEKQRAAEKAKKIEPELQQALTELQEGNKAAETKTTEIEMKKRSSTSMITSLDMLDDTTIRHKEELRKSRKRCPFCWYRFAKTFLIWNCSPCWLKLKEFVHMIIMDPFTDLFLTICIILNVHFLXLEHYPMSLETNNILNIENQVFIGIFTAEMIFKIIAMHPYGYFQLRIFKLGRYWPTFKILMLTLGNSXMALKDLVLLLFTFIFFSAVLGLKLFGSNYKIYVCNIDEDCQLPRWHMHDFLHSFLNVFRILCGEWIETLWDCFKVAGQFSCIPFYMMVILVGNLLILYLFLALVSSFSSYKATTTEENDEAKNLQRAMARIKKGINYVLSKILCKNQNVLEETMDNVSDIYVKENISDHTLSELSNTQDFLKDKEKSSGTEKNTMTENGSQSLIPSPSVSETVPIASEESDIENLDNKEIQSKSGDGSSKEKVKQSSPSECSTVDIAISEEEEMVYERGKPKRLKNGYGRRSSSAQINRDSKKGKMWQNIRKTCCKIVENSCFKCFIGLVTLLSTGALAFEDIYIDQRKTIKILLEYADMIFTYIFILEMLLKWMAYGFKAYFTNGWYQLDFMVVIVFCISLIGKSREELKPLISIKFLRALRVLSQFERMKVVVRALVKTTLPTLNVXLVCLMIWLAFSIIGVHLFAGTFYECIDPTSGERFPVSEVMNRSQCESLVFNESMPWENAKLNFDNVGISFLSLLQVATFNGWITIMNSAVDSIGVSSNIFITVKQEKQYHALKKLMCEVSQKPVPRPENKFQGFVFDLVTNQVFNVIIMVLIFFQAITIMIQSDEQNPKIDIALYWINSVFVTLYTGECVLKLVVFHYNYFTNGWNLFDFMVVVFSITGLFLPLMVGYYLVPPSLVQLILLSRIIHILRPEKGPKVFHDLLLPLMLSLPALLNISLLIFLIMFVYAIFGMYNFAYVKKEAGINDVSNFETFGSSMLCLFQVTIFAGWDGMLNAIFNSKWSDCDPDKINPGSQVRGDCGNPFVGIVYFVSYILISWLIIVWKRFDPDRTQYIDSSKLSDFAAALDPPLLMAKPNKGQIVAMDLPMAVGDRIHCLDILLALTKRVMSKDVSMEKVLSEMESGFTLANPFKITYEPITTTLKRKQEVVSATIIQRAYKSYRLRQNDKKKSDIRMIDGDMEVQAIKEDSYFDKTEGKSTI*