Sequence details bmy_20087 (Coding sequence)

Part of scaffold_2318 (Scaffold)

For more information consult the page for scaffold_2318 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ENSTTRG00000010400 (Bottlenosed dolphin)

Gene Details

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009857, Bottlenosed dolphin)

Protein Percentage 97.42%
cDNA percentage 98.28%
Ka/Ks Ratio 0.27613 (Ka = 0.0112, Ks = 0.0405)

CHMP3 ENSBTAG00000013589 (Cow)

Gene Details

Charged multivesicular body protein 3

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018071, Cow)

Protein Percentage 96.77%
cDNA percentage 96.34%
Ka/Ks Ratio 0.13444 (Ka = 0.0149, Ks = 0.1107)

Additional orthologs identified in other species via the OPTIC pipeline.

CHMP3 (Human)   Chmp3 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 468 bp    Location:12752..33510   Strand:+
Raw sequence 
>bmy_20087
ATGATCAGGTCGAGGAAGACCGTGAGCAAGCTCTATGCATCCAAAGCACACATGAACTCCGTGCTCATGGGGATGAAGAACCAGCTGGCGGTTTTGCGAGTGGCTGGTTCCCTGCAGAAGAGCACAGAAGTGATGAAGGCCATGCAGAGTCTTGTGAAGATCCCAGAAATCCAGGCCACCATGCGGGACCTGTCCAAAGAGATGATGAAGGCTGGGATCATAGAAGAGATGTTAGAGGACACTTTTGAAAGCATGGATGATCAAGAAGAAATGGAAGAAGCAGCAGAAATGGAAATAGACAAAATTCTGTTTGAAATCACCGCAGGGGCCTTGGGCAAAGCACCTAGTAAGGTGACCGACGCCCTCCCAGAGCCTGAACTTCCAGGAGCGATGGCTGCATCAGAAGATGAGGAGGAGGAAGAGGCCCTGGAGGCCATGCAGTCCCGTCTGGCCACACTCCGCAGCTAG

Related Sequences

bmy_20087T0 Protein

Length: 156 aa      
>bmy_20087T0
MIRSRKTVSKLYASKAHMNSVLMGMKNQLAVLRVAGSLQKSTEVMKAMQSLVKIPEIQATMRDLSKEMMKAGIIEEMLEDTFESMDDQEEMEEAAEMEIDKILFEITAGALGKAPSKVTDALPEPELPGAMAASEDEEEEEALEAMQSRLATLRS*