Part of scaffold_2318 (Scaffold)

For more information consult the page for scaffold_2318 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

KDM3A ENSTTRG00000010387 (Bottlenosed dolphin)

Gene Details

lysine (K)-specific demethylase 3A

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009851, Bottlenosed dolphin)

Protein Percentage 93.26%
cDNA percentage 93.03%
Ka/Ks Ratio 0.14285 (Ka = 0.0056, Ks = 0.0391)

KDM3A ENSBTAG00000013580 (Cow)

Gene Details

lysine-specific demethylase 3A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000018069, Cow)

Protein Percentage 94.68%
cDNA percentage 93.99%
Ka/Ks Ratio 0.15998 (Ka = 0.027, Ks = 0.1686)

KDM3A  (Minke Whale)

Gene Details

lysine (K)-specific demethylase 3A

External Links

Gene match (Identifier: BACU005895, Minke Whale)

Protein Percentage 98.89%
cDNA percentage 99.05%
Ka/Ks Ratio 0.24902 (Ka = 0.0052, Ks = 0.021)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3858 bp    Location:102110..45286   Strand:-
>bmy_20088
ATGGTGCTCACGCTCGGAGAAAGTTGGCCAGTATTGGTAGGGAAGCGATTCCTCAGTCTGTCCGCAGCCGACGGCAGCGACGGCGGCCACGACAGCTGGGACTTGGAGCGCGTCGCCGAGTGGCCCTGGCTCTCCGGGACCATTCGAGCCGTCTCCCACACCGACGTTACTAAGAAGGATCTGAAGGTGTGTGTGGAGTTTGATGGGGAATCTTGGAGGAAGAGAAGATGGATAGACGTCTACAGCCTTCTAAGGAGAGCCTTTTTAGTGGAACATAACTTGGTTTTGGCTGAACGAAAGTCTCCTGAAGTTTCTGAGCGAATTGTTCAGTGGCCTGCGATAATGTACAGATCTCTGCTGGACAAAGCTGGTTTGGGATCCATAACGTCTATTCGCTTTTTAGGAGATCAACAAAGAGTATTTCTTTCTAAAGACCTTTTAAAGCCTATACAGATTTTGTCCTTCCTCACCCCCACGGCCCCCTTCGTAAACAAGAATGCGTTTGGAATTCTAGTTAGGGATGTAAACAATCTTCGACTTTCACTTATCGATAATCAGAATGTCAGTAAAGAATTTCAAGCTTTGATTGTGAAACATTTGGATGAAAGCCATCTTTTACAAGGTGACAAAAACTTAGTTGGTTCAGAAGTAAAAATTTATAGCTTGGACCCATCTACTCAGTGGTTTTCTGCAACCATTGTAAATGGAAACCCAACATCAAAAACTCTTCAAGTCAACTGTGAGGAGATTCCAGCACTGAAAATTGTCGATCCATCACTGATTCATGTTGAAGTTGTACATGATAACTTTGTGACATGTGGTAACTCTACAAGAATTGGGGCTGTAAAACGCAAATCTTCTGAGAATAATGGAAGCCTGGTTTCCAAACAAGCAAAATCTTGCTCTGAGGCCTCTCCCAGTGTGTGTCCTGTACAGTCTGTTCCCACAACAGTTTTTAAGGAGATACTGCTCGGCTGCACTGCAGCAACTCCGCCAAGTAAGGACCCGAGACATCAGAGTACTCCCCAGGCTGCCAACTCTCCACCTAACCTTGGAGCAAAAATTCCTCAAGGAAGTCATAAACAGATTTTACCAGAACTTTCTTCCTGTCTAAATACAAAGCCTGAAATACTGAGAACACCAGATGTTGTCTGCAAAGTAGGGCTGCTCTCTTCAAAGTCCTCTCAGATTGGAACTGGAGACTTGAAAACCCTGAGTGAACCAAAGGGAAACTATACCCAGCTGAAGACAAACACTGACCAGGAAAGCAGCTTGGAATCTTTTCCTCCATCATCGACTGACCTTCCTAAGGAGTGCTTACCTACAAAGGCTTCTTCTACGGCAGAACTGGAAATTGCCAGTACTCCTGAACTGCAGAAGCATCTCGAACATGGACCTTCCACATCTGATGTCCTTTCAAATAAGCCAGAAGAGACAGCAGATGTCAATAGTAATAGTCCTAATTGTTGTGTAGAAAACAAGGTAGAACCTTCAACTTTAGGTTGCCAGTCACAGAATTTAAAGGAGTCTTCAGCAAAAGTAGATACTGAAAGCTGTTGTACAAGAAGCAACAATAAAATCCAGAATGCCCCATCCCGGAAGTCGGTTTTGACAGACCCAGCCAAACTCAAGAAGCTGCAGCAGAGCGGTGAGGCCTTTGTGCAGGACGACTCTTGCGTGAACATCGTTGCGCAGCTGCCCAAGTGCCGGGAGTGTCGCTTGGACAGCCTCCGAAAGGATAAGGAGCAGCAGAAAGACTCGCCCGTGTTCTGCCGCTTCTTTCACTTCAGGAGGTTACAGTTCAACAAACACGGTGTATTGCGGGTAGAAGGCTTCTTAACACCAAACAAGTATGACAGTGAAGCAATTGGCTTGTGGTTGCCTTTAACCAAAAATGTTGTTGGGACTGATTTGGACACGGCAAAGTATATCCTGGCCAACATTGGAGACCACTTCTGTCAAATGGTGATTTCTGAAAAGGAAGCTATGTCAACTATTGAGCCACACAGACAGGTTGCTTGGAAGCGAGCTGTCAAAGGTGTTCGAGAAATGTGTGATGTGTGTGACACCACCATCTTCAACCTGCACTGGGTGTGTCCTCGGTGTGGGTTTGGAGTGTGTGTGGATTGCTATCGGATGAAGAGGAAAAATTGCCAACAGGGTGCTGCCTACAAGACTTTCTCTTGGCTGAGATGTGTGAAGAGTCAGATACATGAACCAGAGAACCTCATGCCTACGCAGATCATTCCTGGAAAAGCCCTCTATGATGTTGGAGACATTGTTCATTCTGTAAGAGCAAAATGGGGAATAAAGGCAAATTGTCCCTGTTCAAACAGGCAGTTCAAACTCCTTGCAAAGCCAGCCTCAAAGGAAGACATAAAACAGACTTCCTTGGTTGGAGAAAAATCGACTCTTGGTGCCGTGCTCCAGCAGAACCCCTCGGTGTTGGAGCCCGTGGCTGTAGGTGGGGAGGCTGCGTCCAAGCCGGCCAGCAGCGCGAGGCCTGCCTGCCCAGCCAGCACATCTCCTTTGAACTGGCTGGCAGACCTGACCAGCGGCAATGTCAACAAGGAAAACAAGGAAAAACAACCAACGATGCCAATTTTAAAGAATGAAATCAAATGCCTTCCACCCCTACCCCCCTTGAGCAAATCCAACACAGTCCTCCACACCTTTAACAGCACAATTTTGACACCTGTAAGCAACAACAATTCTGGTTTCCTCCGAAATCTCTTGAATTCCTCTGCAGGAAAGACGGAAAATGGACTCAAGAATACACCAAAAATCCTTGATGACATCTTTGCCTCTTTGGTGCAAAATAAGACTTGCTCCGATTTATCTAAGCGGCCGCAAGGACTGACCATCAAGCCCAGCATCCTGGGCTTTGACACTCCTCACTACTGGCTGTGTGATAGTCGCCTGCTGTGCCTGCAAGATCCCAACAACAAGAGCAACTGGAATGTGTTTAGGGAGTGCTGGAAGCAAGGGCAGCCAGTGATGGTGTCAGGAGTGCATCATAAACTGAACACTGAACTTTGGAAACCGGAATCCTTCAGGAAAGAGTTTGGAAATCAGGAAGTTGACCTCGTTAATTGCAGAACCAATGAAATCATCACAGGAGCCACAGTAGGAGACTTCTGGGATGGATTTGAAGATGTTCCGAACCGCTTGAAAAATGAAAAAGAGCCCATGGTGTTGAAACTTAAGGACTGGCCACCAGGAGAAGATTTTAGAGATATGATGCCCTCCAGGTTTGATGATCTGATGGCCAACATTCCACTGCCTGAGTACACAAGGAGAGATGGCAAACTGAACTTGGCCTCAAGGCTGCCAAACTACTTTGTTAGGCCAGATCTGGGTCCCAAGATGTATAATGCTTATGGATTAATTACTCCAGAAGATCGGAAATATGGAACAACAAATCTTCACTTAGATGTATCTGATGCAGCTAATGTCATGGTCTATGTGGGAATTCCCAAAGGACAGTGTGACCAAGAAGAAGAAGTCCTTAAAACCATCCAAGATGGAGATTCTGATGAACTCACGATAAAGCGATTTATTGAAGGAAAAGAGAAGCCAGGAGCCCTCTGGCACATATATGCTGCTAAGGACACAGAGAAGATACGAGAATTTCTTAAAAAGGTTCATAACTTATATAGCTGTATCAAAGTGGCTGAAGATTTTGTTTCTCCAGAACATGTTAAACACTGCTTCTGGCTTACTCAGGAATTCCGCTATCTGTCACAGACTCATACAAATCATGAAGATAAATTACAGGTAAAGAATGTTATCTACCATGCAGTGAAAGATGCGGTTGCTATGCTGAAAGCCAGTGAATCCAGTTTTGGCAAACCCTGA

Related Sequences

bmy_20088T0 Protein

Length: 1286 aa      View alignments
>bmy_20088T0
MVLTLGESWPVLVGKRFLSLSAADGSDGGHDSWDLERVAEWPWLSGTIRAVSHTDVTKKDLKVCVEFDGESWRKRRWIDVYSLLRRAFLVEHNLVLAERKSPEVSERIVQWPAIMYRSLLDKAGLGSITSIRFLGDQQRVFLSKDLLKPIQILSFLTPTAPFVNKNAFGILVRDVNNLRLSLIDNQNVSKEFQALIVKHLDESHLLQGDKNLVGSEVKIYSLDPSTQWFSATIVNGNPTSKTLQVNCEEIPALKIVDPSLIHVEVVHDNFVTCGNSTRIGAVKRKSSENNGSLVSKQAKSCSEASPSVCPVQSVPTTVFKEILLGCTAATPPSKDPRHQSTPQAANSPPNLGAKIPQGSHKQILPELSSCLNTKPEILRTPDVVCKVGLLSSKSSQIGTGDLKTLSEPKGNYTQLKTNTDQESSLESFPPSSTDLPKECLPTKASSTAELEIASTPELQKHLEHGPSTSDVLSNKPEETADVNSNSPNCCVENKVEPSTLGCQSQNLKESSAKVDTESCCTRSNNKIQNAPSRKSVLTDPAKLKKLQQSGEAFVQDDSCVNIVAQLPKCRECRLDSLRKDKEQQKDSPVFCRFFHFRRLQFNKHGVLRVEGFLTPNKYDSEAIGLWLPLTKNVVGTDLDTAKYILANIGDHFCQMVISEKEAMSTIEPHRQVAWKRAVKGVREMCDVCDTTIFNLHWVCPRCGFGVCVDCYRMKRKNCQQGAAYKTFSWLRCVKSQIHEPENLMPTQIIPGKALYDVGDIVHSVRAKWGIKANCPCSNRQFKLLAKPASKEDIKQTSLVGEKSTLGAVLQQNPSVLEPVAVGGEAASKPASSARPACPASTSPLNWLADLTSGNVNKENKEKQPTMPILKNEIKCLPPLPPLSKSNTVLHTFNSTILTPVSNNNSGFLRNLLNSSAGKTENGLKNTPKILDDIFASLVQNKTCSDLSKRPQGLTIKPSILGFDTPHYWLCDSRLLCLQDPNNKSNWNVFRECWKQGQPVMVSGVHHKLNTELWKPESFRKEFGNQEVDLVNCRTNEIITGATVGDFWDGFEDVPNRLKNEKEPMVLKLKDWPPGEDFRDMMPSRFDDLMANIPLPEYTRRDGKLNLASRLPNYFVRPDLGPKMYNAYGLITPEDRKYGTTNLHLDVSDAANVMVYVGIPKGQCDQEEEVLKTIQDGDSDELTIKRFIEGKEKPGALWHIYAAKDTEKIREFLKKVHNLYSCIKVAEDFVSPEHVKHCFWLTQEFRYLSQTHTNHEDKLQVKNVIYHAVKDAVAMLKASESSFGKP*