Sequence details bmy_20113 (Coding sequence)

Part of scaffold_2312 (Scaffold)

For more information consult the page for scaffold_2312 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TCERG1 ENSTTRG00000000938 (Bottlenosed dolphin)

Gene Details

transcription elongation regulator 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000000885, Bottlenosed dolphin)

Protein Percentage 97.34%
cDNA percentage 96.29%
Ka/Ks Ratio 0.24938 (Ka = 0.022, Ks = 0.0883)

TCERG1 ENSBTAG00000003259 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053509, Cow)

Protein Percentage 96.77%
cDNA percentage 94.43%
Ka/Ks Ratio 0.14653 (Ka = 0.0245, Ks = 0.1673)

TCERG1  (Minke Whale)

Gene Details

transcription elongation regulator 1

External Links

Gene match (Identifier: BACU015996, Minke Whale)

Protein Percentage 97.28%
cDNA percentage 97.12%
Ka/Ks Ratio 0.43594 (Ka = 0.0226, Ks = 0.0519)

Additional orthologs identified in other species via the OPTIC pipeline.

TCERG1 (Human)   Tcerg1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 3156 bp    Location:276191..217821   Strand:-
Raw sequence 
>bmy_20113
ATGGCGGAGCGTGGCGGGGACGGGGGGGACGGTGAGCGATTCAATCCGGGGGAGCTCAGGATGGCTCAACAGCAGGCCTTGAGGTTCCGAGGCCCAGCTCCCCCACCAAATGCAGTGATGCGAGGCCCACCACCTCTCATGCGACCTCCTCCACCTTTTGGTATGATGCGAGGCCCTCCTCCACCACCTCGGCCTCCATTTGGACGTCCTCCTTTTGATCCTAATATGCCACCAATGCCTCCTCCAGGAGGGATTCCTCCACCTATGGGCCCTCCACACCTCCAGAGACCACCTTTCATGCCTCCACCCATGGGAACCATGCCTCCTCCACCGGGTATGATGTTTCCACCAGGAATGCCTCCTGTGACTGCTCCTGGTACTCCAGCACTGCCTCCTACTGAGGAGATATGGGTTGAAAATAAAACTCCAGATGGGAAGGTTTATTATTACAATGCTCGGACACGTGAATCTGCATGGACCAAGCCAGATGGAGTTAAGGTTATTCAGCAGTCAGAACTGACACCTATGCTTGCAGCCCAGGCCCAGGTTCAGGCCCAAGCCCAGGCCCAGGCCCAGGCCCAGGCCCAGGCACAAGCACAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCAAGCTCAAGCGCAGGCCCAGGCACAAGCGCAGGCACAGGCCCAGGCACAGGCTCAGGCCCAGGCCCAGGCCCAGGCCCAGGCCCAGGTGCAGGCGCAAGTGCAAGCACAAGCAGTGGGAGCTTCCACCCCTACGACCAGTAGCCCAGCACCTGCGGTATCCACTTCAACGTCATCATCAACCCCATCCTCTACCACTTCTACCACAACAACTGCCTCTTCAGTTTCGCAGACAGTATCAATTGCCACGCCTACAGTTAGTGTTTCAACTCCTGCTCCTACAGCCACACCTGTGCAAACCGTTCCTCAGCCGCACCCCCAGGCGTTACCTCCTGCCGTTCCTCATTCAGTACCTCAGCCAGCAGCAGCAATACCTGCTTTTCCACCCGTAATGGTACCTCCATTTCGTGTTCCCCTTCCTGGCATGCCAATTCCACTTCCAGGTGTAGCAATGATGCAAATAGTCAGCTGCCCGTATGTAAAGACAGTCGCTACCACCAAGACCGGTGTATTGCCAGGAATGGCCCCTCCTATTGTACCCATGATACACCCCCAGGTTGCTATTGCAGCTTCACCTGCTACCTTAGCTGGAGCAACAGCAGTTTCTGAGTGGACTGAATATAAAACAGCAGATGGGAAGACATATTATTATAATAATAGAACATTAGAATCAACCTGGGAAAAACCCCAAGAGCTAAAGGAAAAAGAAAAATTAGAGGAGAAGATTAAAGAGCCAATTAAAGAACCTTCTGAAGAACCTCTGCCAATGGAGACGGAGGAGGAGGATCCTAAAGAAGAGCCAATAAAGGAGATAAAAGAGGAGCCCAAAGAAGAAGAGATGACCGAAGAAGAAAAAGCTGCCCAGAAGGCAAAACCAGTGGCTACTACTCCTATTCCTGGTACTCCATGGTGTGTTGTTTGGACTGGTGATGAGAGGGTCTTCTTTTATAATCCTACCACCCGTCTTTCTATGTGGGACCGACCTGATGATCTGATTGGAAGGGCGGATGTTGACAAAATTATTCAGGAGCCCCCTCATAAAAAAGGAATGGAAGAAGTGAAGAAACTAAGGCACCCAACCCCAACAATGCTGTCCATCCAAAAGTGGCAGTTCTCTATGAGCGCAATTAAAGAAGAACAAGAATTAATGGAAGAAATGAATGAAGATGAACCTGTTAAAGCCAAAAAACGGAAGAGAGACGATAATAAAGACATTGATTCAGAGAAAGAAGCTGCCATGGAAGCTGAAATTAAAGCTGCCCGAGAAAGGGCCATTGTCCCTCTGGAGGCCCGAATGAAGCAGTTCAAGGACATGCTGCTAGAGAGAGGGAGCCAACTTAATTATGAGGCAATACATTTTTTTATTTTAAAGGTGTCTGCTTTTTCAACATGGGAGAAGGAGTTACACAAGATAGTATTTGATCAGTATGTAAAGACCAGGGCAGAGGAAGAACGCAGGGAAAAGAAAAACAAAATAATGCAAGCCAAGGAAGATTTCAAAAAAATGATGGAAGAAGCAAAATTTAATCCAAGAGCTACTTTTAGTGAATTTGCAGCCAAGCATGCTAAAGATTCAAGATTCAAAGCAATTGAAAAGATGAAAGATCGAGAAGCCTTGTTTAATGAATTTGTGGCAGCTGCAAGGAAGAAAGAGAAAGAAGATTCGAAGACCAGAGGTGAGAAGATAAAATCAGATTTCTTTGAACTATTATCTAATCATCACTTGGACAGTCAGTCTCGATGGAGCAAAGTAAAAGACAAAGTAGAAAGTGATCCACGTTACAAAGCAGTGGATAGTTCATCAATGAGAGAAGACCTTTTCAAACAGTATATTGAAAAAATAGCCAAGAATTTAGACTCAGAAAAAGAAAAGGAGCTTGAAAGGCAAGCCCGCATTGAGGCAAGCCTTCGAGAACGAGAAAGAGAGGTGCAGAAGGCTCGTTCAGAGCAAACAAAAGAAATAGATCGAGAGAGAGAACAGCACAAACGAGAAGAAGCTATCCAGAATTTCAAGGCTCTTCTGTCTGATATGGTACGTTCTTCAGATGTGTCCTGGTCTGATACTCGGAGGACTCTTCGGAAAGATCACCGCTGGGAATCTGGATCCTTGTTGGAAAGAGAAGAGAAAGAGAAGCTTTTTAATGAACACATTGAAGCACTTACCAAAAAGAAGAGGGAGCACTTTAGGCAACTTTTGGATGAAACTTCTGCAATCACCTTAACATCCACGTGGAAAGAAGTAAAAAAAATCATTAAGGAAGATCCTCGGTGCATTAAGTTCTCCTCCAGTGACAGGAAAAAACAAAGAGAGTTTGAAGAATACATCAGAGACAAATACATCACAGCCAAAGCTGACTTCAGGACGCTTTTGAAAGAGACCAAATTTATAACATATAGAATGACAAACGTACTAGACTGTGTGCCAGAGGAGAGGCGCAAACTGATTGTGGCATATGTGGATGACCTGGATCGCCGGGGTCCACCCCCACCTCCCACAGCATCAGAGCCCACAAGACGATCAACAAAATAA

Related Sequences

bmy_20113T0 Protein

Length: 1052 aa      View alignments
>bmy_20113T0
MAERGGDGGDGERFNPGELRMAQQQALRFRGPAPPPNAVMRGPPPLMRPPPPFGMMRGPPPPPRPPFGRPPFDPNMPPMPPPGGIPPPMGPPHLQRPPFMPPPMGTMPPPPGMMFPPGMPPVTAPGTPALPPTEEIWVENKTPDGKVYYYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTASSVSQTVSIATPTVSVSTPAPTATPVQTVPQPHPQALPPAVPHSVPQPAAAIPAFPPVMVPPFRVPLPGMPIPLPGVAMMQIVSCPYVKTVATTKTGVLPGMAPPIVPMIHPQVAIAASPATLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSEEPLPMETEEEDPKEEPIKEIKEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDLIGRADVDKIIQEPPHKKGMEEVKKLRHPTPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPVKAKKRKRDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGSQLNYEAIHFFILKVSAFSTWEKELHKIVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKEKLFNEHIEALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDRKKQREFEEYIRDKYITAKADFRTLLKETKFITYRMTNVLDCVPEERRKLIVAYVDDLDRRGPPPPPTASEPTRRSTK*