Part of scaffold_2351 (Scaffold)

For more information consult the page for scaffold_2351 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SRM ENSTTRG00000001316 (Bottlenosed dolphin)

Gene Details

spermidine synthase

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001239, Bottlenosed dolphin)

Protein Percentage 91.87%
cDNA percentage 95.12%
Ka/Ks Ratio 0.32472 (Ka = 0.0408, Ks = 0.1258)

SRM ENSBTAG00000005304 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006978, Cow)

Protein Percentage 95.45%
cDNA percentage 94.44%
Ka/Ks Ratio 0.05761 (Ka = 0.0188, Ks = 0.3266)

SRM  (Minke Whale)

Gene Details

spermidine synthase

External Links

Gene match (Identifier: BACU008772, Minke Whale)

Protein Percentage 68.78%
cDNA percentage 76.77%
Ka/Ks Ratio 0.25649 (Ka = 0.2145, Ks = 0.8361)

Genome Location

Sequence Coding sequence

Length: 795 bp    Location:56691..52879   Strand:-
>bmy_20129
ATGGAGCCCGGCCTTGACGGCCCCTCCGCCTCCGGCCCCGCTGCCATCCGCGAGGGCTGGTTCCGCGAGACGTGCAGCCTGTGGCCCGGCCAGGCCCTGTCTCTGCAGGTGGAGCAGCTGCTACACCATCGACGCTCGCGGTACCAGGATATCCTCGTCTTTCGCAGTAAGAGCTACGGTAACGTGCTGGTGTTGGACGGTGTCATCCAGTGCACAGAGAGGGACGAGTTCTCCTACCAGGAGATGATCGCCAACCTGCCTCTTTACAGCCACCCCAACCCACGCAAGAAGTTCCTGCCGGGCATGGCCATTGGCTACTCTAGCTCAAAGCTGACCCTACACGTGGGTGACGGTTTTGAGTTCATGAAACAGAACCAGGACGCCTTCGACGTCATCATCACTGACTCCTCAGACCCCATGGGCCCTGCTGAGAGTCTGTTCAAGGAGTCCTACTACCAGCTCATGAAGACCGCCCTCAAAGAGGACGGCATCCTCTGCTGCCAGGGCGAGTGCCAGTGGCTGCACCTGGACCTCATCAAGGAGATGCGGCACTTCTGCAAGTCGCTCTTCCCCGTGGTGGACTACGCCTACTGCACCATCCCCACCTACCCCAGTGGCCAGATCGGCTTCATGCTGTGCAGCAAAAACCCAAGCACCAACTTCCGGGAGCCCGTGCAACAGCTGACGCAGAAGCAGGTGGAAGAGATGCAGCTGAAATACTACAACTCCGACGTGCACCAGGCAGCCTTCGTCCTGCCCGAGTTTGCCCGGAAGGCTCTGAATGATGTGCGCTGA

Related Sequences

bmy_20129T0 Protein

Length: 265 aa      View alignments
>bmy_20129T0
MEPGLDGPSASGPAAIREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKSYGNVLVLDGVIQCTERDEFSYQEMIANLPLYSHPNPRKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGILCCQGECQWLHLDLIKEMRHFCKSLFPVVDYAYCTIPTYPSGQIGFMLCSKNPSTNFREPVQQLTQKQVEEMQLKYYNSDVHQAAFVLPEFARKALNDVR*