Sequence detailsbmy_20130 (Coding sequence)

Part of scaffold_2351 (SequenceType object (1))

For more information consult the page for scaffold_2351 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

EXOSC10ENSTTRG00000001320 (Bottlenosed dolphin)

Gene Details

exosome component 10

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000001240, Bottlenosed dolphin)

Protein Percentage 95.82%
cDNA percentage 96.61%
Ka/Ks Ratio 0.34779 (Ka = 0.0228, Ks = 0.0655)

EXOSC10ENSBTAG00000002590 (Cow)

Gene Details

exosome component 10

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000003354, Cow)

Protein Percentage 92.78%
cDNA percentage 91.32%
Ka/Ks Ratio 0.14657 (Ka = 0.0384, Ks = 0.2617)

Additional orthologs identified in other species via the OPTIC pipeline.

EXOSC10 (Human)   Exosc10 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3006 bp    Location:82914..62170   Strand:-
Raw sequence 
>bmy_20130
ATGGCGCCTCCCGGTCCCCGAGAGTCCAAGGCCCAGTCGGCGACGAGTGCGACCAAGTCTGACGGGGAGATGGTGCTGCCCGGCTTCCCCGATGCAGACAGCTTCGTGAAGTTTGCTCTTGGGGCAGTGATGGCAGTCACCAAGGCATCTGGGGGCCTACCACAGTTTGGTGATGAGTATGATTTTTACCGAAGTTTTCCTGGCTTCCAGGCATTTTGTGAAACACAGGGAGACAGGTTGCTTCAGTGCATGAGTAGGGTAATGCAGTACCATGGGTGTCGAAGCAACATTAAGGGTCAGAATAAAGTGACTGAGCTGGAGGACAAGTTTGATTTGCTAGTTGATACCAATGATGTTATTCTGGAAAGAGTGGGCATTTTACTGGATGAAGCATCAGGTGTAAATAAGAATCAACAGCCTGTCCTCCCTGCAGGATTGCAGGTCCCTAAAACCATAGTGTCCAGCTGGAACCGGAAGGCAGGAGAATATAGCAAAAAAACAAAATCTGAAACATTCCGGCTGCTTCATGCAAAAAACATCATCCGACCTCAGCTTAAATTCCGAGAGAAGATTGACAATTCCAACACGCCATTTCTTCCTAAAATCTTCGTCAAGCCCAATGCTCAGAAACCCCTCCCTCAGGCACTCTCTAAAGAAAGGCGGGAGCGCCCACAGGACCGACCTGAGGACTTGGATGTCCCCCCTGCCCTGGCGGATTTCATCCATCAGCAGAGAACCCAGCAGGTGGAGCAGGACATGTTTGCACATCCTTACCAGTACGAACTAGATCACTTCACTCCACCAGACTCAGTCCTTCAAAAGCCAGAGCCTCAGTTATACAGACCTGTAGGAGAGACACCCTGCCACTTCGTGTCCTCGCTGGATGAACTAGTGGAACTCAATGAAAAGCTCCTGAAGTGTCAAGAATTTGCTGTAGACTTGGAGCACCACTCTTACCGGAGCTTCCTAGGGCTCACCTGCCTGATGCAGATTTCCACCCGGACAGAAGACTTCATCGTTGACACCCTGGAGCTTCGCAGTGACATGTACATTCTCAATGAGAGCCTCACAGACCCAGCTATTGTTAAGGTCTTCCACGGTGCCGATTCAGACATAGAATGGCTACAGAAGGACTTTGGGTTGTACGTGGTAAACATGTTTGATACCCATCAGGCAGCACGCCTTCTTAACCTGGGCAGGCACTCCCTCGACCATCTGCTGAAGCTCTACTGCAACGTGGAAACAAACAAGCAGTATCAGCTGGCCGACTGGAGAATACGACCTCTGCCTGAGGAAATGCTCAACTATGCACGGGATGACACTCATTACCTGCTTTACATCTATGATAAGATGAGGCTGGAGCTGTGGGAGCGTGGCAACGAGCAGCCCACGCAGCTGCAGGTAGAGTGGCAGCGGAGCCGTGACATCTGCCTCAAGAAATTCATCAAACCTATCTTCACGGATGAATCTTACCTGGAACTGTATAGGAAGCAAAAGAAACATCTCAACACACAGCAACTAACGGCCTTTCAGCTGCTGTTTGCCTGGAGGGATAAGACAGCTCGCAGGGAAGATGAAAGTTATGGATATGTCCTGCCAAACCACATGATGCTAAAGATAGCTGAGGAACTGCCCAAGGAGCCTCAGGGCATCGTAGCCTGCTGCAACCCTGTGCCACCTCTTGTACGGCAGCAGATCAATGAAATGCATCTTTTAGTTCAGCAGGCGCGAGAGATGCCCCTGCTCAAGTCTGAAGTTGCAGCTGGAGTGAGGAAGAACGGGCCACCGCCCAACCCTGAGAGGTTGGAGAATGCTCTCTTCGGCCCCCACGACTGCTCCCACGCCCCGTCAGATGGCTGTCCTCTCATTGCAACCAGTGGGCCTGTGCCGGTGCAGAAGCAGGAGGGCCTCCCCACTGCCCAAGAAGAAGAGGAGGCCCTGCCGGACACCGGATGCCTTATCGCTACCGCTGTCATCACGTTATTTAACGAACCTAGTGCTGAAGAAAATGGAAAGAGTCCATTAACAGTTGCACAGAAAAAAGCCCAGAACATAATGGAGTCCTTTGAAAATCCATTTCGGATGTTTCTGCCTTCACTAGAATCCCGGGCTCACGTTTCTCAGACAGCAAAGTTTGATCCATCTTCGAAAATCTATGAAATCAGCAACCGTTGGAAGCTGGCAAGCCAGGTACAGGTACAAAAAGAATCTAAAGAAACTGCCAAGAAGAAGGCAGCTGAGCAAACAGTTGCCCGGGACCAGGCCCAGGAGGAGTACAGAGCAGCAGCGGAGCAGGCCGTGTCCGTCCGCCAGCAGGCTGCCCTAGAGAACGCGGCCAAGAAGAGAGAACGAACAACAAGTGACCCGAGGACGACAGAACAGAAACAAGACAAGAAACGACTCAAAATTTCCAAGAAGTTAAAAGACCCAGATCCACCAGAAAAAGATTTTACCCCATATGACTACAGCAAGTCGGATTTCAAGGCTTTTGCTGGAGACAGCAAATCCACACCTTCTTCCCAGTTTGACCCAAATAAGCAGCCACAGTCTGGCAAGATGTCCAGTTGCAAGAAAACCAAAGTCACACCAGTGGCGCTGGAGTCCTTGATGGGCCATCTGAGCTCAGGGGTGTTTTCCTGTGCGTCTTGCAGTCATGGTTGTCACTCACCCTCAATGGCTTCTTTTCAGAAATGCACTGCAGCCAAAAAAATTAGACAGTCGATGGGAAACAAAAGCATGTCCTTTCCAACTGGGAAGTCAGACAGGTACGTGCCAGACGGCCGGTGTGGCCCGGGAAACCCGGTGAGCAGCTCCGAGGCCTTACCTGGGAAGACTTTCAGAGGGCCTCTCCCAACCCGATCCCGCCCTTTGTCATTTGGAAAACTAGCTGGGACAGGAGAGGTGATCGCTGGATGCCAGTCACAGCCACGGCCTCCCAGGGCTCCAGTCACCCTCAGCGCTCTGCCGGTACCATACGGTTTCCCAGGGGCACCTCAGAGCAAATAG

Related Sequences

bmy_20130T0 SequenceType object (3)

Length: 1002 aa      View alignments
>bmy_20130T0
MAPPGPRESKAQSATSATKSDGEMVLPGFPDADSFVKFALGAVMAVTKASGGLPQFGDEYDFYRSFPGFQAFCETQGDRLLQCMSRVMQYHGCRSNIKGQNKVTELEDKFDLLVDTNDVILERVGILLDEASGVNKNQQPVLPAGLQVPKTIVSSWNRKAGEYSKKTKSETFRLLHAKNIIRPQLKFREKIDNSNTPFLPKIFVKPNAQKPLPQALSKERRERPQDRPEDLDVPPALADFIHQQRTQQVEQDMFAHPYQYELDHFTPPDSVLQKPEPQLYRPVGETPCHFVSSLDELVELNEKLLKCQEFAVDLEHHSYRSFLGLTCLMQISTRTEDFIVDTLELRSDMYILNESLTDPAIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVETNKQYQLADWRIRPLPEEMLNYARDDTHYLLYIYDKMRLELWERGNEQPTQLQVEWQRSRDICLKKFIKPIFTDESYLELYRKQKKHLNTQQLTAFQLLFAWRDKTARREDESYGYVLPNHMMLKIAEELPKEPQGIVACCNPVPPLVRQQINEMHLLVQQAREMPLLKSEVAAGVRKNGPPPNPERLENALFGPHDCSHAPSDGCPLIATSGPVPVQKQEGLPTAQEEEEALPDTGCLIATAVITLFNEPSAEENGKSPLTVAQKKAQNIMESFENPFRMFLPSLESRAHVSQTAKFDPSSKIYEISNRWKLASQVQVQKESKETAKKKAAEQTVARDQAQEEYRAAAEQAVSVRQQAALENAAKKRERTTSDPRTTEQKQDKKRLKISKKLKDPDPPEKDFTPYDYSKSDFKAFAGDSKSTPSSQFDPNKQPQSGKMSSCKKTKVTPVALESLMGHLSSGVFSCASCSHGCHSPSMASFQKCTAAKKIRQSMGNKSMSFPTGKSDRYVPDGRCGPGNPVSSSEALPGKTFRGPLPTRSRPLSFGKLAGTGEVIAGCQSQPRPPRAPVTLSALPVPYGFPGAPQSK*