Sequence detailsbmy_20141 (Coding sequence)

Part of scaffold_2333 (SequenceType object (1))

For more information consult the page for scaffold_2333 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GTF2H5ENSTTRG00000006297 (Bottlenosed dolphin)

Gene Details

general transcription factor IIH, polypeptide 5

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000005956, Bottlenosed dolphin)

Protein Percentage 55.36%
cDNA percentage 61.31%
Ka/Ks Ratio 1.36402 (Ka = 0.3063, Ks = 0.2245)

GTF2H5ENSBTAG00000008543 (Cow)

Gene Details

General transcription factor IIH subunit 5

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000011263, Cow)

Protein Percentage 75.0%
cDNA percentage 76.79%
Ka/Ks Ratio 0.46265 (Ka = 0.239, Ks = 0.5165)

GTF2H5 (Minke Whale)

Gene Details

general transcription factor IIH, polypeptide 5

External Links

Gene match (Identifier: BACU019148, Minke Whale)

Protein Percentage 76.79%
cDNA percentage 82.14%
Ka/Ks Ratio 1.29201 (Ka = 0.2249, Ks = 0.1741)

Genome Location

Sequence SequenceType object (2)

Length: 264 bp    Location:10464..19950   Strand:+
Raw sequence 
>bmy_20141
ATGAAGCAATTTCTGCTGTACTTGGATGAGTCAAATGCCCTAGGGAAGAAGTTCATCATTCAAGACATTGATGACACTCACATCTTCGTAATAGCAGAGTTGGTTAATGTCCTCCAGGAGCGATTACACATTAAACCTCACTTAGCTCTAAAGAAACTAAATAAAACCTTTGATATAATGCCTTCTGATTTAACTAGTATACTGGAATCATTCGATCTCTTAACCATCTTAACAGATAGGAAAAGGATACTGCTAAAGAACTAA

Related Sequences

bmy_20141T0 SequenceType object (3)

Length: 88 aa      View alignments
>bmy_20141T0
MKQFLLYLDESNALGKKFIIQDIDDTHIFVIAELVNVLQERLHIKPHLALKKLNKTFDIMPSDLTSILESFDLLTILTDRKRILLKN*