Part of scaffold_2336 (Scaffold)

For more information consult the page for scaffold_2336 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

R3HCC1L ENSTTRG00000005883 (Bottlenosed dolphin)

Gene Details

R3H domain and coiled-coil containing 1-like

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000005558, Bottlenosed dolphin)

Protein Percentage 93.71%
cDNA percentage 96.46%
Ka/Ks Ratio 0.64481 (Ka = 0.0329, Ks = 0.051)

C10ORF28 ENSBTAG00000021856 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000029136, Cow)

Protein Percentage 78.38%
cDNA percentage 88.5%
Ka/Ks Ratio 0.87191 (Ka = 0.1257, Ks = 0.1442)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1821 bp    Location:55405..37043   Strand:-
>bmy_20144
ATGCAGCAAGAAGCAGAGAGATGCAGAGTTCGAGTCAGGAGGCCTGACATGGCGCTTTATGTACCCAAAGCTCGAAGGGGTATAGTAGTGCACAAATCAGGTGAGGAGGGAAAAAGCTGTGGTCCACCTAACTCCATGGTGAAAGAAGAACAAAAGGAAGATTCTTTCTCTCAAAAGGAGATCATTAGAGAGAAGCCTGAGGCTCAAAGACTAAGTATTAATCCTGATAAAAAGGAGCACAATCGTAGGGAAGGAAAGAAAGCTTCAACAAAATTTAATAAAGATGCGTGGCTTCAAGAAAGAAATAAAGATAATGTTTGTACTAAGAGGGCAACCACAGAATCCAAAAAAGTATTATCCCAAGGACATCAGCAAAGAGTCCCAAATCCTGGGATTATACCTATCGTACCTTTACAAAGACATTTTAAACCAAAGAAGATAGAGTGTTTGGAGGTTGAAACCAGAGATGTGACAGAACAGGATGGGTTGCTTCAATCTCAGTCTTGTTCAGAAATCAGTAAGGCTCAGGTTCCAAACAAACCATTCCAAAATGTGGAATTCTGTGATTTCAATAGGCATGAACTAAATGGGGAAACATTTGAAGATAGAAATTTGGAAAGCAGAATGGAAACTGATGCCAGGGTTGCAGAGATACTATCCCAGTTTCCTGGAGATTTTAGTTCTGTGGTGAAACCTGAGAGTATGATTGCACCAGTACAACCAAGCTCTGATTCTGGAATTGTACAACAAGGCATGCAGACATCGGGTGGAATGCTGAAGCGCAGCAACGGAAGCATCACCACTGATTCTGTTCCTGGAAGTCCAGTTGGTATCATTGATCAGACTTGCATAGACTTGGATGCTGAGAATGTTGGTGATACAGACAACAGTACAGATTTCATCTTGGGTCAGAAAGGTATAGATTCCATTCCTGAGACTATGGGTCACATCTCTCATCTGATGACTATAGTCAGCAAATTAGAGAGCACAAATGACATTTTTGATCCAACAATGATTAGAGAGTGTGAGGAGAATGACAGCACTGCTGATGAGTTATGTGTAAAGCGTGAATCTTCTGATACAGCAGTCCTTGCTCATGAAACATATACAAATAGTGGGTCTAAGAGTGTAGGTGACATTACCAATAAGACATGTATGATGGACATTACAGATACCATAACTGATCAGATAACTGTAGTTGCTGTTAGAGTAGCTCATGAGGCCTGTAGCAACACAAGTAGTTTCTCAGACTATTTAGAAATGACTGCAGATACAGCCCCTCTTCATGTAGCTAAAAGGGGGAATGACACTGAACATTTCAGCAACCTGACTGCTTGCTCAGATATTTATGCTGAGAGTATTTCATCTAGTTTCACAGAGTCAACAGGAAAGTTGATAGAGAGCTTGTCAGATTGTGCTTCCTCCTTACCTATAAAGAAGATTGCTGGTAGTAATTGTAACACTTTTTTGGACTCTGAACTCAGTATGTTAAATGGGACAAAAGTATTTTCAGACGGTGCCTTGGGCAGTGATCAAGATTGTACTGGTGATATAACAGAGGCATTGCATGAACTTAAAACTGCTGAAGAGTTCAAAACAAAAGAAGAAGATGGTTCAAAGACTATAGAGTTTGGTGTAACCTTTCCTGATACAGAATCAGTATCTGTGGAAACATCCATGGAATTGAAAGCAACTGATACGTCTCACACAGAAGCAAGTGCTGCTGCTGAGGAGAGCTGGGAGTCTATGTTTAATGATGATGGTGACTGCCTGGACCCACGTCTTCTGCAAGAGAAACGAAACTATGGGTCTGATCAATAA

Related Sequences

bmy_20144T0 Protein

Length: 607 aa      View alignments
>bmy_20144T0
MQQEAERCRVRVRRPDMALYVPKARRGIVVHKSGEEGKSCGPPNSMVKEEQKEDSFSQKEIIREKPEAQRLSINPDKKEHNRREGKKASTKFNKDAWLQERNKDNVCTKRATTESKKVLSQGHQQRVPNPGIIPIVPLQRHFKPKKIECLEVETRDVTEQDGLLQSQSCSEISKAQVPNKPFQNVEFCDFNRHELNGETFEDRNLESRMETDARVAEILSQFPGDFSSVVKPESMIAPVQPSSDSGIVQQGMQTSGGMLKRSNGSITTDSVPGSPVGIIDQTCIDLDAENVGDTDNSTDFILGQKGIDSIPETMGHISHLMTIVSKLESTNDIFDPTMIRECEENDSTADELCVKRESSDTAVLAHETYTNSGSKSVGDITNKTCMMDITDTITDQITVVAVRVAHEACSNTSSFSDYLEMTADTAPLHVAKRGNDTEHFSNLTACSDIYAESISSSFTESTGKLIESLSDCASSLPIKKIAGSNCNTFLDSELSMLNGTKVFSDGALGSDQDCTGDITEALHELKTAEEFKTKEEDGSKTIEFGVTFPDTESVSVETSMELKATDTSHTEASAAAEESWESMFNDDGDCLDPRLLQEKRNYGSDQ*