Sequence details bmy_20167 (Coding sequence)

Part of scaffold_2361 (Scaffold)

For more information consult the page for scaffold_2361 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CHST13 ENSTTRG00000005234 (Bottlenosed dolphin)

Gene Details

carbohydrate (chondroitin 4) sulfotransferase 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004930, Bottlenosed dolphin)

Protein Percentage 93.41%
cDNA percentage 93.91%
Ka/Ks Ratio 0.13718 (Ka = 0.036, Ks = 0.2621)

CHST13 ENSBTAG00000008778 (Cow)

Gene Details

carbohydrate sulfotransferase 13 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011567, Cow)

Protein Percentage 84.41%
cDNA percentage 87.94%
Ka/Ks Ratio 0.12509 (Ka = 0.0828, Ks = 0.6621)

Additional orthologs identified in other species via the OPTIC pipeline.

CHST13 (Human)   Chst13 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1206 bp    Location:192162..186835   Strand:-
Raw sequence 
>bmy_20167
ATGACCCCCAAGACCCGGGCAGGCCCTGAGGGCCTCACCCCTCCACGTGCCCTGGTCACAGGAGAGCTTGGTCCTTGTTCTGGGGACACTGGAGTGGGGAGGGGCCCTGAGGCTGCCAGAGGCCTGGCACGTGGCCTGGACAGCGGGCTTCAGCCCTTTCTGTCCGCCTGTGCCCGGGGCCAGGGGAGGCTGGACCCAGCCAGCCTGCTGACCCCTAACCCTCACGGCTCCATGCACGTGGCTGGCAGAGCAGTGAACGCCCCTCTCCTTACTCCCCCAGCGTTTGAAAACAGGGCCGTGGGCTCCAGCTGGCTTGGCGGCAAGAGGAGGAGTCCCCTGCAGATGCTCTACGACCTGTACCAGGGCCCGCGCTCCGCGCTGGCCGAGGTGCACCGGCAGCGGCGCGACCTGCTGCGCCGCGCCTGCAGCCGCCACACGCGCCGGCAGCGCCTGCTGCGGCCGGAGGACCTGCGGCACGTGCTGGTGGACGACGCGCACGGCCTGCTCTACTGCTACGTGCCCAAGGTGGCCTGCACCAACTGGAAGCGCGTGCTGCTGGCGCTAAGCGGCCGCGGCCCAGGAGACCCGCGCGCCATACCCGCGCACGAGGCGCACGCGCCCGGCCGCCTGCCCTCGCTGGCCGACTTCAGTCCGGCCGAAGTCAACCGGCGCCTGCGCGCCTACCTAGCCTTCCTGTTTGTGCGCGAGCCCTTCGAGCGCCTGGCCTCGGCCTACCGGAACAAGCTGCAGCGGCCCTGGGGCGCCACCTTCCAGCGCCGCTTCGGCACCGGCATCGTGCGGCGTCTGCGGCCGCGCCCGGGCCCCGACGCGCTGGTCCGCGGCCACGACGTGCGCTTCGACGAGTTCCTGGCCTACCTGCTGGACCCGCGCACGCGCCGCGACGGGCCCTTCAACGAGCACTGGGAGCGCGCCCACGCGCTCTGCCACCCGTGCCGCCTGCGCTACGACGTCGTGGGCAAGTTCGAGACGCTGGCGGAGGACGCGGCCTTCGTGCTGAGCCTGGTGGGCGCGCCCGGCCTGCGCTTCCCCGAGCCGCCGTCCAGGGCCCGGGCCGCCGCGCGCGACCGTGCCGCGCACCTCTTCCGCGACATCAGCCCCTTCTACCAGCAGCGCCTCTACGGCCTCTACAGGATGGACTTCCTGCTCTTCAACTACTCCGCTCCCTCCTACCTGCGGCTGCGCTAG

Related Sequences

bmy_20167T0 Protein

Length: 402 aa      View alignments
>bmy_20167T0
MTPKTRAGPEGLTPPRALVTGELGPCSGDTGVGRGPEAARGLARGLDSGLQPFLSACARGQGRLDPASLLTPNPHGSMHVAGRAVNAPLLTPPAFENRAVGSSWLGGKRRSPLQMLYDLYQGPRSALAEVHRQRRDLLRRACSRHTRRQRLLRPEDLRHVLVDDAHGLLYCYVPKVACTNWKRVLLALSGRGPGDPRAIPAHEAHAPGRLPSLADFSPAEVNRRLRAYLAFLFVREPFERLASAYRNKLQRPWGATFQRRFGTGIVRRLRPRPGPDALVRGHDVRFDEFLAYLLDPRTRRDGPFNEHWERAHALCHPCRLRYDVVGKFETLAEDAAFVLSLVGAPGLRFPEPPSRARAAARDRAAHLFRDISPFYQQRLYGLYRMDFLLFNYSAPSYLRLR*