Sequence detailsbmy_20178 (Coding sequence)

Part of scaffold_2341 (SequenceType object (1))

For more information consult the page for scaffold_2341 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

NRGNENSTTRG00000013219 (Bottlenosed dolphin)

Gene Details

neurogranin (protein kinase C substrate, RC3)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000012533, Bottlenosed dolphin)

Protein Percentage 100.0%
cDNA percentage 99.15%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0367)

NRGNENSBTAG00000001474 (Cow)

Gene Details

Neurogranin NEUG(55-78)

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001930, Cow)

Protein Percentage 100.0%
cDNA percentage 95.73%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1992)

NRGN (Minke Whale)

Gene Details

neurogranin (protein kinase C substrate, RC3)

External Links

Gene match (Identifier: BACU020055, Minke Whale)

Protein Percentage 100.0%
cDNA percentage 99.54%
Ka/Ks Ratio 0.001 (Ka = 0.0, Ks = 0.0169)

Additional orthologs identified in other species via the OPTIC pipeline.

NRGN (Human)   Nrgn (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 414 bp    Location:152876..160136   Strand:+
Raw sequence 
>bmy_20178
ATGGGGGGGCTCAGGTTACTTTCTCCCGCAGGGCCGAGCGCGGGAGAGAGGACCCGAGAGCTGAGCGGCTGGTTTGGCCCCGGTCCGCTGCCTCCCCACTGCCCCAGAGTCCCCACCCGGCACCGCACCGACCCCCTGCGCCAGCCTCCGTCCCAGCCAAGGGCCCCCAACACCAGCATGGACTGCTGCACCGAGAGCGCCTGCTCCAAGCCGGACGACGACATTCTAGACATCCCGCTGGACGATCCGGGTGCCAATGCAGCCGCTGCCAAAATCCAGGCGAGTTTCCGGGGCCACATGGCGCGGAAGAAGATAAAGAGCGGAGAGCGCGGCCGGAAGGGCCCGGGCCCCGGGGGTCCTGGCGGAGCTGGGGGCGCCCGGGGAGGCGCGGGCGGCGGCCCCAGCGGAGACTAG

Related Sequences

bmy_20178T0 SequenceType object (3)

Length: 138 aa      View alignments
>bmy_20178T0
MGGLRLLSPAGPSAGERTRELSGWFGPGPLPPHCPRVPTRHRTDPLRQPPSQPRAPNTSMDCCTESACSKPDDDILDIPLDDPGANAAAAKIQASFRGHMARKKIKSGERGRKGPGPGGPGGAGGARGGAGGGPSGD*