Part of scaffold_2341 (Scaffold)

For more information consult the page for scaffold_2341 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HEPACAM ENSTTRG00000013256 (Bottlenosed dolphin)

Gene Details

hepatic and glial cell adhesion molecule

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000012576, Bottlenosed dolphin)

Protein Percentage 92.35%
cDNA percentage 93.3%
Ka/Ks Ratio 0.22579 (Ka = 0.0446, Ks = 0.1975)

HEPACAM ENSBTAG00000018650 (Cow)

Gene Details

Hepatocyte cell adhesion molecule

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000030280, Cow)

Protein Percentage 92.11%
cDNA percentage 89.95%
Ka/Ks Ratio 0.10387 (Ka = 0.0468, Ks = 0.4509)

HEPACAM  (Minke Whale)

Gene Details

hepatic and glial cell adhesion molecule

External Links

Gene match (Identifier: BACU010208, Minke Whale)

Protein Percentage 60.08%
cDNA percentage 62.28%
Ka/Ks Ratio 0.34706 (Ka = 0.1133, Ks = 0.3266)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1521 bp    Location:292387..288645   Strand:-
>bmy_20185
AAAGGGGTGGGTGTGAGGGATGACAGGGGAGCGGAGGGGCCAGAGCTACAGTCGAAGGGTAAGAAGGAAGGACTGACAGGGAGTGAAGGGCCCAGAAGGGTGAGGCATGGAGAGACCAGAGGACTCGAAGATGGGAGTGAGGTTAGGAGCCAGGGCCTGACGCTGCCCTCGCCTCGTGGGTCTCTGTTCGCAGAGCCCCTGGAGGGGGTGAACATCACCAGCCCAGTGCGCCTGATCCATGGCACAGTGGGGAAGGCGGCCCTGCTTTCCGTGCAGTACAGCAGCACCAGCAGTGACAAACCCGTTGTCAAGTGGCAGCTGAAGCGGGACAAGCCAGTGACCGTGGTTCAGTCCATCGGCACAGAGGTCATTGGTACCCTGCGGCCCGACTATCGAGACCGCATCCGCCTCTTTGAAAACGGTTCCCTGCTTCTTAGCGACCTGCAACTGGCCGACGAGGGCACCTATGAGGTTGAGATCTCTATCACCGATGACACCTTCACTGGGGAGAAGACCATCAACCTCACTGTAGATGTGCCCATTTCGAGGCCCCAGGTGTTAGTGGCTTCGACCACGGTGCTGGAGCTCAGCGAGGCCTTTACCCTGAACTGCTCGCACGAGAATGGCACCAAGCCCAGCTACACATGGCTGAAGGACGGCAAGCCCCTCCTCAACGACTCGCGGATGCTCCTGTCCCCCGACCAAAAGGTGCTCACCATCACCCGCGTGCTCATGGAGGACGACGACCTGTACAGCTGTGTGGTGGAGAACCCCATCAGCCAGGGCCGCAGCCTGCCCGTCAAGATCACCGTGTACAGAAGAAGCTCCCTCTACATAATCTTGTCCACAGGAGGCATCTTCCTCCTTGTGACCTTGGTGACAGTCTGTGCCTGCTGGAAACCCTCCAAAAAGTCTGGGAAGAAGAGGAAGCTGGAGAAGCAAAACTCCCTGGAATATATGGATCAGAATGATGACCSCCTGAAAGCAGAAGGTGAGCTCCCAGCCACGCACTCACCCGTCCCATCTTCACTCAGATCAGTGAGCTGCTGGGAAAAGGCCGAAATGGGCGACAAGGAAGCCAGCTCTGCAGGGGCCCTTCCTCCACCAACTGCAAGAAGACTGCAGAGCAGGGAGAGGAGCGGCCAAGCAGACACCCTCCCGCGAAGTGGAGAGCAGGAGCGGAAGAACCCCATGGCACTCTACATCCTGAAGGACAAGGACTCCCCGGAGCCCGAGGAGAACCCCGCCCCGGAGCCTCGGAGCGCGACGGAGCCCGGCCCGCCCGGCTACTCCGTGTCGCCGGCCGTGCCGGGCCGCTCGCCGGGGCTGCCCGGCCGCTCTGCCCGCCGCTACCCGCGCTCTCCAGCGCGCTCCCCCGCCACGGGCCGGACGCACACGTCGCCGCCCCGGGCCCCGAGCTCGCCCGGCCGCTCGCGCAGCGCCTCGCGCACACTGCGGACTGCGGGCGGCGTGCACCTGATCCGCGAGCAAGACGAGGCCGGCCCGGTGGAGATCAGCGCC

Related Sequences

bmy_20185T0 Protein

Length: 507 aa      View alignments
>bmy_20185T0
KGVGVRDDRGAEGPELQSKGKKEGLTGSEGPRRVRHGETRGLEDGSEVRSQGLTLPSPRGSLFAEPLEGVNITSPVRLIHGTVGKAALLSVQYSSTSSDKPVVKWQLKRDKPVTVVQSIGTEVIGTLRPDYRDRIRLFENGSLLLSDLQLADEGTYEVEISITDDTFTGEKTINLTVDVPISRPQVLVASTTVLELSEAFTLNCSHENGTKPSYTWLKDGKPLLNDSRMLLSPDQKVLTITRVLMEDDDLYSCVVENPISQGRSLPVKITVYRRSSLYIILSTGGIFLLVTLVTVCACWKPSKKSGKKRKLEKQNSLEYMDQNDDXLKAEGELPATHSPVPSSLRSVSCWEKAEMGDKEASSAGALPPPTARRLQSRERSGQADTLPRSGEQERKNPMALYILKDKDSPEPEENPAPEPRSATEPGPPGYSVSPAVPGRSPGLPGRSARRYPRSPARSPATGRTHTSPPRAPSSPGRSRSASRTLRTAGGVHLIREQDEAGPVEISA