Sequence detailsbmy_20187 (Coding sequence)

Part of scaffold_2337 (SequenceType object (1))

For more information consult the page for scaffold_2337 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RIPPLY1ENSTTRG00000007540 (Bottlenosed dolphin)

Gene Details

ripply1 homolog (zebrafish)

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007133, Bottlenosed dolphin)

Protein Percentage 87.3%
cDNA percentage 90.21%
Ka/Ks Ratio 0.61304 (Ka = 0.0915, Ks = 0.1493)

RIPPLY1ENSBTAG00000044115 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000053728, Cow)

Protein Percentage 75.61%
cDNA percentage 83.94%
Ka/Ks Ratio 0.67959 (Ka = 0.1647, Ks = 0.2424)

RIPPLY1 (Minke Whale)

Gene Details

ripply transcriptional repressor 1

External Links

Gene match (Identifier: BACU007391, Minke Whale)

Protein Percentage 82.32%
cDNA percentage 85.16%
Ka/Ks Ratio 0.70295 (Ka = 0.1523, Ks = 0.2167)

Additional orthologs identified in other species via the OPTIC pipeline.

RIPPLY1 (Human)   Ripply1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 495 bp    Location:60956..58404   Strand:-
Raw sequence 
>bmy_20187
ATGGGCCCTGCTGCTCGCGCCCCAGCCCCGGCCTCAGCTCCAGCCCTAGCACAAGGCCCCCTGGTGCTCCCTGGCCTGGGAAACCCATCGCCCCTTCTCTCCTCTGGACAAGAAGTAGACAGAAGTGAACGAGGAGCTTGTCCTTGGAGACCCTGGCTGTCTGCTACCAATGACCTCCCAAGGCAGGTGAGGAAACCTGTGGATTTGTGGGGGCCGTGTTTCTTCTCTGTCCACAGGCTCTTCTGGCCTAAATCCCGTTCCTTTGACTACCTGTACAGTGATGGGGAGATTTTACTGCAGAACTTCCCTGTCCAGGCAACCATCAACCTCTATGAGGACTCAGCCAGCGAGGAGGAGGAGGATGAGGAAGAGGAGGACGAGGAGAAGGAGGGGGCAGATGAAAAAGGGCCAGAAGGGTGTGTGAAGGCACCAGGGCCAGCACCGCACGGGGCCTCAGCTCCTCGTCCCTCCCTGCTCCTGACCTGTCCCAACTGA

Related Sequences

bmy_20187T0 SequenceType object (3)

Length: 165 aa      View alignments
>bmy_20187T0
MGPAARAPAPASAPALAQGPLVLPGLGNPSPLLSSGQEVDRSERGACPWRPWLSATNDLPRQVRKPVDLWGPCFFSVHRLFWPKSRSFDYLYSDGEILLQNFPVQATINLYEDSASEEEEDEEEEDEEKEGADEKGPEGCVKAPGPAPHGASAPRPSLLLTCPN*