Part of scaffold_2429 (Scaffold)

For more information consult the page for scaffold_2429 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SGCD ENSTTRG00000005061 (Bottlenosed dolphin)

Gene Details

sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000004770, Bottlenosed dolphin)

Protein Percentage 54.94%
cDNA percentage 60.08%
Ka/Ks Ratio 0.03961 (Ka = 0.3323, Ks = 8.39)

SGCD ENSBTAG00000044046 (Cow)

Gene Details

delta-sarcoglycan

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000053370, Cow)

Protein Percentage 55.56%
cDNA percentage 60.49%
Ka/Ks Ratio 0.03232 (Ka = 0.3255, Ks = 10.0724)

SGCD  (Minke Whale)

Gene Details

sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)

External Links

Gene match (Identifier: BACU000773, Minke Whale)

Protein Percentage 55.56%
cDNA percentage 60.08%
Ka/Ks Ratio 0.06024 (Ka = 0.3259, Ks = 5.4091)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 513 bp    Location:232766..189739   Strand:-
>bmy_20211
GCTGATGCTGTGGAAGCTCAGTGTAAAAGATTTGAAGTGAGAGCAAGTGAAGATGGCAGGGTGCTGTTTTCTGCAGATGAAGATGAGATTACCATTGGGGCTGAAAAGCTGAAAGTTACAGGCACTGAAGGAGCAGTGTTCGGGCACTCTGTCGAAACACCTCACATCAGAGCAGAACCTTCCCAAGACCTCAGGCTTGAATCACCAACAAGGTCCTTGATAATGGAAGCTCCCCGGGGGGTCCAGGTGAGTGCTGCAGCTGGAGACTTCAAGGCTGCCTGCAGGAAGGAGCTCCATTTGCAGTCCACAGAGGGGGAGATATTTTTGAATGCGGATACCATCCGGCTGGGAAACCTGCCGACCGGCTCTTTTTCCTCTTCTTCACCCAGCTCCTCGCACTCTCGGCAGACAGTGTATGAACTGTGTGTCTGCCCCAACGGCAAACTGTACCTGTCTCCAGCCGGGGCCGCGTCTACTTGTCAGTCCAGTAGCAACGTCTGCTTGTGGAGCTGA

Related Sequences

bmy_20211T0 Protein

Length: 171 aa      View alignments
>bmy_20211T0
ADAVEAQCKRFEVRASEDGRVLFSADEDEITIGAEKLKVTGTEGAVFGHSVETPHIRAEPSQDLRLESPTRSLIMEAPRGVQVSAAAGDFKAACRKELHLQSTEGEIFLNADTIRLGNLPTGSFSSSSPSSSHSRQTVYELCVCPNGKLYLSPAGAASTCQSSSNVCLWS*