Part of scaffold_2379 (Scaffold)

For more information consult the page for scaffold_2379 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SMOC1 ENSTTRG00000014787 (Bottlenosed dolphin)

Gene Details

SPARC related modular calcium binding 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014021, Bottlenosed dolphin)

Protein Percentage 66.8%
cDNA percentage 68.25%
Ka/Ks Ratio 0.23278 (Ka = 0.1774, Ks = 0.7623)

SMOC1 ENSBTAG00000030599 (Cow)

Gene Details

SPARC-related modular calcium-binding protein 1 precursor

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000040815, Cow)

Protein Percentage 84.98%
cDNA percentage 84.45%
Ka/Ks Ratio 0.18905 (Ka = 0.1085, Ks = 0.5738)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 780 bp    Location:16611..60883   Strand:+
>bmy_20258
ATGGGCTGCTCCCCTTCCAGCGAGCAGGAACGACCAGCCATCAGTTCCTTAGGGCCAGGCCAGGTCCTGGCAGGGAAGGCACAGGAGTGGGAGTCACCGCAGGCTGTGTCTTCTCTTGCAGAGAAAGTTCACTCTTGTGACCAGGAGAGACAGAGCGCCCTGGAAGATGCCCGGCAGAATCCCCGTGAGGGCATTGTCATCCCCGAGTGTGCCCCCGGAGGGCTCTATAAGCCAGTGCAGTGCCACCAATCCACTGGCTACTGCTGGTGTGTGCTGGTGGACACAGGGCGTCCGCTGCCCGGGACCTCCACACGCTACGTGATGCCCAGTTGTGAGAGTGACGCCAGGGCTAAGAGTGTGGAGGTGGACGACCCCTTCAAGGACAGGGAGCTGCCAGGCTGTCCAGAAGGGAAGAAAATGGAATTTATCACCAGCCTACTGGATGCTCTCACCACTGACATGGTGCAGGCCATTAACTCAGCAGCACCCACTGGAGGTGGGAGGTTCTCAGAGCCAGACCCCAGCCACACCCTGGAGGAGCGAGTGGTGCACTGGTACTTCAGCCAGCTGGACAGCAACAGCAGCGACGACATTAACAAGAGGGAAATGAAGCCCTTCAAGCGCTACGTGAAGAAGAAAGCCAAGCCCAAGAAATGCGCCCGGCGTTTCACTGACTACTGTGACCTGAACAAGGACAAGGTCATCTCACTTCCCGAGCTGAAGGGCTGCCTAGGTGTTAGCAAAGAAGGTGAGTGCTCGTCTGTGCTCCTGGCCCGGTAG

Related Sequences

bmy_20258T0 Protein

Length: 260 aa      View alignments
>bmy_20258T0
MGCSPSSEQERPAISSLGPGQVLAGKAQEWESPQAVSSLAEKVHSCDQERQSALEDARQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDTGRPLPGTSTRYVMPSCESDARAKSVEVDDPFKDRELPGCPEGKKMEFITSLLDALTTDMVQAINSAAPTGGGRFSEPDPSHTLEERVVHWYFSQLDSNSSDDINKREMKPFKRYVKKKAKPKKCARRFTDYCDLNKDKVISLPELKGCLGVSKEGECSSVLLAR*