Part of scaffold_2385 (Scaffold)

For more information consult the page for scaffold_2385 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TRIM17 ENSTTRG00000006366 (Bottlenosed dolphin)

Gene Details

tripartite motif containing 17

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006022, Bottlenosed dolphin)

Protein Percentage 89.14%
cDNA percentage 93.64%
Ka/Ks Ratio 0.47379 (Ka = 0.0568, Ks = 0.12)

BT.91974 ENSBTAG00000018673 (Cow)

Gene Details

E3 ubiquitin-protein ligase TRIM17

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000024853, Cow)

Protein Percentage 81.32%
cDNA percentage 86.3%
Ka/Ks Ratio 0.25369 (Ka = 0.1061, Ks = 0.4183)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1563 bp    Location:247043..253881   Strand:+
>bmy_20272
ATGGTCTCCATCGCGCAAACGCAGGCTTTCCTGGGCCGCGTTTGCAGGCGTGGCTGGGGGCTCCAGGCGAGGTGCAGCGTGCACCCCTTTCCCCTACTCCATCTGCAAAAGGATGCTGAGAGAGTACTATGGAGAGCCCAGACAGAGCTCCAGACAGAGGATGTGGCAGGACACTCCGTTCCTTCCCCAGGAGCCATAGATGCTGTGGAACTCGCCAGAAAATTGCAGGAGGAGGCCACTTGCTCCATCTGTCTCGACTACTTCACAGACCCCGTGATGACCACCTGCGGTCACAATTTCTGCCGAGAGTGCATCCGGCTGACCTGGGAGAAGGCCAAAGGCCAGAAAAGGAGGAGAAAGTGTAAGGGCTCCTTTCCCTGCCCCGAGTGCCGCAAGCTATCCCCCCAGATGAACCTGTGGCCCAACCGTCTGCTGACCAAGGTGGCCGAGATGGCGCGGCAGCACCCCAGCCTACAGAGCAGGGACCTGTGCCAGGTGCACCAGGAGCTGCTCAAACTCTTTTGTGAGGACGACCAGAGTCCCATCTGCGTCATCTGCAGGGAGTCCCAGGAACACCGGCCCCACAGGGTGGTCCCTATTGAGGAGGCTGTGCAGAAATACAAGTTGAAGTTGGAGGAGAACATGGGATACCTGCGAGAGGAAATGATGAAGACCGGGAAGTTGCAAGCCAAGGAGGAACAGACCTTGGCTGAATGGCAGGAGAAGGTGAAGGAGCGGAGGGAGCGCATCGTGGTTGAGTTTGAGAAGATGGGCCTCCTCCTGATGGAGGTGAAGCAGCGCCTCCTCCAGGCCCTGAAGGAGGAGGAGGAGGAGACAGTGGCAAAGCTGCAGAAGAGCATGGCCTCACTGGACCAGCAGAGTCACTCCTTGAAGATGCTGCTACTGCAGCTGGAGGACAGGAATGAGTGCACACTGCTCCAGATGCTGCAGGGCCTCACCCTCCCCACCCTGACCCTGAAAGGTTCCCCTCTCCCCTCCATCCCGGGCCTGTCTCCAGAGAATGTGGTGCCCAATCCCTCCACGGCATACCCCTACCTCCTCTTATATGAGAGCCACCAGAGGCGCTACCTGAGCACCCCGATGGATGGCACACCCCGTGGCAAGGACAGGTTCCTAGCCTACCCCTGTGCAGTGGGCCAAGAGACCTTCTCCTCAGGGAGGCACTACTGGGAGGTGGGCATGAACCTCACTGGTGATGCACTGTGGGCCCTGAGCGTGTGCAGGGACAACATGAGCCGGAGGGGCAGGGTCCCCAAGTGCCCAGAAAATGGGTTCTGGGTGGTGCAGCTATGCAAGGGAAAGAGGTATGTACCTGCCACATCTGCCCTGACCCCCGTCACGCTGACTGAGCCCCCCAGCCACATGGGCATCTTCCTGGATTTCGAGGCCGGAGAGGTGTCCTTCTACAATGTGAACAATGGGTCCCACCTGCATACCTACTCCCAGCCCGCCTTCTCTGGCCCCCTGCAACCCTTCTTCTGCCTTGGGGCCCCCAAATTGGGCCAGATGGTCATCTCTACAGTGACCCTATGGGTGAAGTGA

Related Sequences

bmy_20272T0 Protein

Length: 521 aa      View alignments
>bmy_20272T0
MVSIAQTQAFLGRVCRRGWGLQARCSVHPFPLLHLQKDAERVLWRAQTELQTEDVAGHSVPSPGAIDAVELARKLQEEATCSICLDYFTDPVMTTCGHNFCRECIRLTWEKAKGQKRRRKCKGSFPCPECRKLSPQMNLWPNRLLTKVAEMARQHPSLQSRDLCQVHQELLKLFCEDDQSPICVICRESQEHRPHRVVPIEEAVQKYKLKLEENMGYLREEMMKTGKLQAKEEQTLAEWQEKVKERRERIVVEFEKMGLLLMEVKQRLLQALKEEEEETVAKLQKSMASLDQQSHSLKMLLLQLEDRNECTLLQMLQGLTLPTLTLKGSPLPSIPGLSPENVVPNPSTAYPYLLLYESHQRRYLSTPMDGTPRGKDRFLAYPCAVGQETFSSGRHYWEVGMNLTGDALWALSVCRDNMSRRGRVPKCPENGFWVVQLCKGKRYVPATSALTPVTLTEPPSHMGIFLDFEAGEVSFYNVNNGSHLHTYSQPAFSGPLQPFFCLGAPKLGQMVISTVTLWVK*