Part of scaffold_2434 (Scaffold)

For more information consult the page for scaffold_2434 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

BEST1 ENSTTRG00000010392 (Bottlenosed dolphin)

Gene Details

bestrophin 1

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009855, Bottlenosed dolphin)

Protein Percentage 69.75%
cDNA percentage 69.82%
Ka/Ks Ratio 0.29535 (Ka = 0.0307, Ks = 0.104)

BEST1 ENSBTAG00000011186 (Cow)

Gene Details

bestrophin-1

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000043395, Cow)

Protein Percentage 94.2%
cDNA percentage 92.82%
Ka/Ks Ratio 0.12614 (Ka = 0.029, Ks = 0.2301)

BEST1  (Minke Whale)

Gene Details

bestrophin 1

External Links

Gene match (Identifier: BACU005386, Minke Whale)

Protein Percentage 98.56%
cDNA percentage 98.76%
Ka/Ks Ratio 0.29209 (Ka = 0.0077, Ks = 0.0264)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1458 bp    Location:130228..138630   Strand:+
>bmy_20295
ATGAACCTGGTGTCGTGCTTCGTCGAGGGCAAGGACGAGCAGGGCCGGCTGCTGCGGCGCACGCTCATGCGCTACGCCAACCTGGGCAACGTGCTCATCCTGCGTAGCGTCAGTGCTGCGGTCTACAAACGCTTTCCCAGTCCCCAACACCTGGTGAAAGCAGGCTTTATGACCCCCTCGGAACACAAGCACTTACAAAAACTGAGCTTGCCACACAACTCATTCTGGATGCCCTGGGTGTGGTTTGCCAACCTGTCAACGAAGGCCTGGATTGGAGGTCGAATCCGGGACCCTGTCCTGCTCCAGAGCCTGCTCAACGAAATGAACACCTTGCGTACTCAGTGTGGACAGCTGTATGCCTACGACTGGATCAGTATCCCACTGGTGTACACTCAGGTGGTGACCGTGGCGGTATACAGCTTCTTCCTGGCTTGCCTGATTGGGCGGCAGTTTCTGAACCCAGCCAAGGCCTACCCCGGCCACGAGATGGACCTCGTTGTACCCCTCTTCACATTCCTGCAGTTCTTCTTCTATGCTGGCTGGCTGAAGGTGGCAGAGCAGCTCATCAACCCGTTCGGAGAGGACGATGATGACTTTGAGACCAACTGGATTGTCGACAGGAGTTTGCAGGTGTCCCTGTTGGCTGTAGATGAGATGCACCAGGACCTGCCGCCGATGGAGCGAGATATGTACTGGAACGAGCCAGAACCACAACCCCCCTACACAGCCGCTTCTGCCCAGTCTCGTCGGCCCTCCTTTTTTGGCTCCACCTTCAACATCAGTCTGGATAAGGAGGATATGGAGTTTCAGCCAGATCTGGAGGAGGAGGAGGAGGAGAGGGCTCACCCTGGCATCACTGGCCGTTTCCTAGGGCTGCAATCCCATGACCGCCAGCCCCCCAGGACAAACTCAAAGACCAAACTACTGTGGCCGAAGAAAGAAGTCCTTTCCCGTGAGGGCCAGCCCAAGAACCCCGGGGGAGCCGGACAGGACACCAGTGATCAGGAAGACAGCAAGGCCTGGAAAGGGGAGGATGCCTTCCAGTCTGCTGTACTATATGGGAGGTCAGGCTACCACAGTGCCCCACAGACACCCCTCAGCCACACCCCTATGGTCTTCCCACCTGGACAGTCAGCACCCTCAAGTCTTTGCAAAGTCTCAGGCATAGATGACACTGTCAAAGACCTAAGCCTTCAGCCTGCAACTCCCAGGTCCAAGAAGAGTTCTGAATTGCTCCCAGAGAGTGCTGGGGCCTCAACGGAGCACCCGGAAGTGAGTCACATGAGGAGGAAAACTGTTGAGTTTAACCTAACGGACATGTCAGAGGCCCCTGAACATCTCAGAGAACCGCATTTGGGACAGTCAACAAGCAACATACACACTATACTCAAAGATCGGGGCGATCCCTATTGGGCCTTGGAAAACAGGTCTGTCCTCTACCCAAACCAGGGTCACTGA

Related Sequences

bmy_20295T0 Protein

Length: 486 aa      View alignments
>bmy_20295T0
MNLVSCFVEGKDEQGRLLRRTLMRYANLGNVLILRSVSAAVYKRFPSPQHLVKAGFMTPSEHKHLQKLSLPHNSFWMPWVWFANLSTKAWIGGRIRDPVLLQSLLNEMNTLRTQCGQLYAYDWISIPLVYTQVVTVAVYSFFLACLIGRQFLNPAKAYPGHEMDLVVPLFTFLQFFFYAGWLKVAEQLINPFGEDDDDFETNWIVDRSLQVSLLAVDEMHQDLPPMERDMYWNEPEPQPPYTAASAQSRRPSFFGSTFNISLDKEDMEFQPDLEEEEEERAHPGITGRFLGLQSHDRQPPRTNSKTKLLWPKKEVLSREGQPKNPGGAGQDTSDQEDSKAWKGEDAFQSAVLYGRSGYHSAPQTPLSHTPMVFPPGQSAPSSLCKVSGIDDTVKDLSLQPATPRSKKSSELLPESAGASTEHPEVSHMRRKTVEFNLTDMSEAPEHLREPHLGQSTSNIHTILKDRGDPYWALENRSVLYPNQGH*