Part of scaffold_2414 (Scaffold)

For more information consult the page for scaffold_2414 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SH3RF2 ENSTTRG00000016710 (Bottlenosed dolphin)

Gene Details

SH3 domain containing ring finger 2

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015843, Bottlenosed dolphin)

Protein Percentage 91.58%
cDNA percentage 93.4%
Ka/Ks Ratio 0.43961 (Ka = 0.0541, Ks = 0.123)

SH3RF2 ENSBTAG00000006762 (Cow)

Gene Details

putative E3 ubiquitin-protein ligase SH3RF2

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000008898, Cow)

Protein Percentage 87.13%
cDNA percentage 88.2%
Ka/Ks Ratio 0.27151 (Ka = 0.0825, Ks = 0.304)

SH3RF2  (Minke Whale)

Gene Details

SH3 domain containing ring finger 2

External Links

Gene match (Identifier: BACU015992, Minke Whale)

Protein Percentage 21.5%
cDNA percentage 37.08%
Ka/Ks Ratio 0.10604 (Ka = 1.2551, Ks = 11.8365)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1215 bp    Location:52500..24224   Strand:-
>bmy_20325
ATGATCGAGTTTTCTTTTTCAGACAACGCTTTTACTCTCAGGGCAAATCAAAGCACTGGACGGCGGCTCCCTGCTCATCCAGAACAGGGAGGCTTTGTCAGCACTTATCACCCTGCACCTGCCTCCCCAGGACATTCCACGGCCATCATCAGTCTGCCTGGCTCCCAGCAACACCTCTCAGCTAACATGTTTGTAGCCCTGCACTCCTACTCAGCCCATGGACCTGACGAACTGGACCTGCAGAAGGGAGAGGGCATCAGGGTCCTGGGGAAGTACCAGGATGGCTGGCTCAGGGGCGTCTCCTTGGTGACCGGGCGAGTCGGCATCTTCCCCAACAACTATGTCATCCCCATTTTCAGAAAGACATCTAGTGTTCCAGACTCCCGGAGCTCTGCTCTCTACACCACATGGACATTATCCACCCCCTCTGTGTCCTCCCAAGGCAGCATTTCAGAAGGTGATCCCCGGCAGAGCCAGCCCTTCAAGTCCGTCTTCGTGCCCACGGCCATAGTCAACCCCGTGCGGAACCTGGCCGGTCTGGGGACCCTGGGGCAGGGCTCCCTCCGCAAAGCGCGGAGCAGCATGAGAAAGAATGGATCCCTGCAGAGACCCGTCCAGTCAGGGGTCCCCACCCTCGTGGTGGGCTCCCTGAGACGCAGCCGCACCATGGTCGTCCGGCCTCAGCAGTTCCAATTCTACCAGCCACAGGGGGCCCCCTCCTCAGCCTCGGCGGTGGTGGCGGAGATGGGACCCAAGCCCACTGCCACTGGGGAGCCTGCCCTCACGTGCGTCAGCAGGGGCAGCGACACCCGGATCCACTCGGCAGCCAGTTCCCTCATCATGGAAGGCAAAGAAATCCCCGCCAGGAGTGAGCCTCTACCAAAACTGCCTGCATCTCCCCCGCCATCCATCCTGGTGAAACCAGAGAACTCAAGAAATGGCAGCGAAAAGCAAGTCAAAACCGTGAGATTTCAGAATTACAGCCCTCCTCCCGCCAAACATCACACCTCTGGGAAGCCTGAACAAGCAGCCACCCCGAAGGGGTCCCAGCCTGAAGCAGCCCCCTTGGGCCCAGAGATGACCGTCCTATTCGCCCACCGAAGCGGCTGCCATTCTGGACAGCAGACAGACCTCCGGAGGAAGTCAACTTTTAGCAAAACCATGACCCCAGCGCCCACTGCCTCGGCCACGCAGACCGTGTTTCCCAGCAAATGA

Related Sequences

bmy_20325T0 Protein

Length: 405 aa      View alignments
>bmy_20325T0
MIEFSFSDNAFTLRANQSTGRRLPAHPEQGGFVSTYHPAPASPGHSTAIISLPGSQQHLSANMFVALHSYSAHGPDELDLQKGEGIRVLGKYQDGWLRGVSLVTGRVGIFPNNYVIPIFRKTSSVPDSRSSALYTTWTLSTPSVSSQGSISEGDPRQSQPFKSVFVPTAIVNPVRNLAGLGTLGQGSLRKARSSMRKNGSLQRPVQSGVPTLVVGSLRRSRTMVVRPQQFQFYQPQGAPSSASAVVAEMGPKPTATGEPALTCVSRGSDTRIHSAASSLIMEGKEIPARSEPLPKLPASPPPSILVKPENSRNGSEKQVKTVRFQNYSPPPAKHHTSGKPEQAATPKGSQPEAAPLGPEMTVLFAHRSGCHSGQQTDLRRKSTFSKTMTPAPTASATQTVFPSK*