Sequence details bmy_20331 (Coding sequence)

Part of scaffold_2408 (Scaffold)

For more information consult the page for scaffold_2408 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

LSM14B ENSBTAG00000021558 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000028723, Cow)

Protein Percentage 95.63%
cDNA percentage 93.49%
Ka/Ks Ratio 0.09814 (Ka = 0.021, Ks = 0.2136)

LSM14B  (Minke Whale)

Gene Details

LSM14B, SCD6 homolog B (S. cerevisiae)

External Links

Gene match (Identifier: BACU011265, Minke Whale)

Protein Percentage 86.89%
cDNA percentage 87.76%
Ka/Ks Ratio 0.47118 (Ka = 0.1106, Ks = 0.2348)

Additional orthologs identified in other species via the OPTIC pipeline.

LSM14B (Human)   Lsm14b (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1335 bp    Location:128828..142611   Strand:+
Raw sequence 
>bmy_20331
ATGCCTGGAGACCGCTCTGACTGGATCTGGGCTAACCCTGGGGCCGCGCTGTCCACCCTCTCCTCACCAACGCGATTCTCCAGGAGCAGAGATGCACTGGAGCATCGGTTGGCGGCTCCATGCTCCCGTTTAAAGCGTCTTTCTGCTCTAATTCAGACGCTTCGGTCTGTGGGTTTACCCTTTTGTGACCGATCCCTCCCTGCGGGCGCTGTGAGGTCCTTTGGTACTGAAGACCGTCCCACAGATAGGCCTGCCCCCCCTAGAGAGGAAGTGTATGAGTACATCATCTTCCGGGGAAGTGACATCAAAGACATTACCGTGTGTGAACCTCCGAAAGCTCAGCACGCGCTCCCTCAGGACCCTGCTATTGTTCAATCTTCCCTGGGCTCGGGCTCGGCCTCCTCCTTCCAGCCACACGTGCCTTACAGCCCCTTCCGAGGGATGCCGCCCTACAGCCAGCTGGCCGCCAGCTCCCTGCTCAGCCAGCAGTATGCCGCTTCCTTGGGTTTAGGAGCTGGCTTTCCGGCTGTCTCAGTCAGCAAGAGCCCCATGGTGGAGCAGGCTGTCCAGACTGGTTCTCTTGATAACCTGAACACCAAAAAGCTGTTACCTGGCAAGGGCACCGCGGGGATGCAGCTCAACGGGCGCCCAGCCCCGCCAAGCAGCAAGGCCGCCAGCGATGTAGCTCAGCCGGCAGCTGTGCAGACTCAAGGGCAGGTGAATGACGAGAACAGAAGACCTCAGAGGAGGCGATCAGGGAACAGACGAACAAGGAATCGCTCCAGAGGGCAAAGCCGTCCAACTAACGTCAAGGAAAACACAATCAAGTTTGAAGGCGACTTTGATTTTGAGAGTGCAAATGCCCAGTTCAACCGAGAGGAGCTGGACAAAGAATTTAAGAAGAAACTGAATTTTAAAGACGACAAAGCTGAGAAAGGGGAGGAGAAGGACCTGGCGGTGGTGACCCAGAGTGACGAGGCCCCTGCTGAGGAGGATCATCTGGGGCCCAACTGCTACTATGACAAATCCAAGTCCTTCTTTGACAACATTTCCTCTGAACTCAAGACCAGTTCCAGGCGGACGACGTGGGCTGAAGAGAGGAAGCTCAACACGGAGACCTTCGGGGTGTCGGGAAGGTTTCTTCGTGGCCGTAGTTTCCGGGGTGGATTTCGAGGGGGCAGGGGCAACGGTGCGGCCCGTCGTAACCCGACGTCCCACAGAGCTGGGACTGGCAGRGTGCTCTCGCTGAAGCGGCACCGACGCCAGGCTGTGTCTACGAGGACGTTGGAAAACGCTGCACTTCCTGCGGGAGACGTGGGTCACTTTGTTTACTGA

Related Sequences

bmy_20331T0 Protein

Length: 445 aa      View alignments
>bmy_20331T0
MPGDRSDWIWANPGAALSTLSSPTRFSRSRDALEHRLAAPCSRLKRLSALIQTLRSVGLPFCDRSLPAGAVRSFGTEDRPTDRPAPPREEVYEYIIFRGSDIKDITVCEPPKAQHALPQDPAIVQSSLGSGSASSFQPHVPYSPFRGMPPYSQLAASSLLSQQYAASLGLGAGFPAVSVSKSPMVEQAVQTGSLDNLNTKKLLPGKGTAGMQLNGRPAPPSSKAASDVAQPAAVQTQGQVNDENRRPQRRRSGNRRTRNRSRGQSRPTNVKENTIKFEGDFDFESANAQFNREELDKEFKKKLNFKDDKAEKGEEKDLAVVTQSDEAPAEEDHLGPNCYYDKSKSFFDNISSELKTSSRRTTWAEERKLNTETFGVSGRFLRGRSFRGGFRGGRGNGAARRNPTSHRAGTGRVLSLKRHRRQAVSTRTLENAALPAGDVGHFVY*