Part of scaffold_2408 (Scaffold)

For more information consult the page for scaffold_2408 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PSMA7 ENSTTRG00000011050 (Bottlenosed dolphin)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000010473, Bottlenosed dolphin)

Protein Percentage 93.59%
cDNA percentage 94.16%
Ka/Ks Ratio 0.44678 (Ka = 0.0478, Ks = 0.107)

PSMA7 ENSBTAG00000005127 (Cow)

Gene Details

Proteasome subunit alpha type-7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000006760, Cow)

Protein Percentage 93.59%
cDNA percentage 90.03%
Ka/Ks Ratio 0.14181 (Ka = 0.0461, Ks = 0.325)

PSMA7  (Minke Whale)

Gene Details

proteasome (prosome, macropain) subunit, alpha type, 7

External Links

Gene match (Identifier: BACU011264, Minke Whale)

Protein Percentage 93.9%
cDNA percentage 93.9%
Ka/Ks Ratio 0.61286 (Ka = 0.0566, Ks = 0.0924)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 705 bp    Location:148179..144144   Strand:-
>bmy_20332
ATGACACGTAACCTCGTGTCAGCTCCTGAAGTGCAGTGTCGCCATTTATTGAAGGTTGGTGTCCGAGGAAAAGACATTGTTGTTCTTGGTGTGGAGAAGAAGTCAGTGGCCAAACTGCAGGATGAAAGAACAGTGCGGAAGATCTGTGCTCTGGACGACAATGTCTGCATGGCATTCGCGGGCCTCACTGCTGACGCAAGGATAGTCATCAACAGGGCGCGGGTGGAATGCCAGAGCCACCGGCTGACCGTGGAGGACCCGGTCACCGTGGAGTACATCACACGGTACATCGCCAGTCTGAAGCAGCGCTACACACAGAGCAACGGGCGCAGGCCGTTTGGCATCTCTGCCCTTATTGTGGGTTTTGACTTTGATGGTACCCCCCGACTCTATCAGACTGACCCCTCAGGCACGTACCATGCCTGGAAGGCGAATGCTATAGGCAGGGGTGCCAAGTCAGTGCGTGAATTTCTAGAGAAGAATTATACTGACGAAGCCATTGAAACAGACGACCTGACTATTAAGCTGGTTATCAAGGCCCTCCTGGAAGTGGTTCAGTCAGGTGGCAAAAACATAGAACTTGCTGTCATGAGACGAGATCAACCCCTCAAGATTTTAAATCCTGAAGAAATTGAGAAATATGTTGCTGAGATTGAAAAAGAAAAAGAAGAAAATGAAAAGAAGAAACAAAAGAAAGCATCATGA

Related Sequences

bmy_20332T0 Protein

Length: 235 aa      View alignments
>bmy_20332T0
MTRNLVSAPEVQCRHLLKVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIELAVMRRDQPLKILNPEEIEKYVAEIEKEKEENEKKKQKKAS*