Sequence details bmy_20333 (Coding sequence)

Part of scaffold_2408 (Scaffold)

For more information consult the page for scaffold_2408 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

SS18L1 ENSBTAG00000014438 (Cow)

Gene Details

Calcium-responsive transactivator

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000019202, Cow)

Protein Percentage 83.83%
cDNA percentage 84.74%
Ka/Ks Ratio 0.12229 (Ka = 0.1052, Ks = 0.8607)

Additional orthologs identified in other species via the OPTIC pipeline.

SS18L1 (Human)   Ss18l1 (Mouse)  

Genome Location

Sequence Coding sequence

Length: 1467 bp    Location:155334..176373   Strand:+
Raw sequence 
>bmy_20333
ATGACGTCGTCGTCGTCATCGGGTCCTCACGGTTGCGCTTGTGAGTCTTTGGAAGTTGAACACGTGTGTCAGACACAGAGCATTGTGCCGCCTGCCCTGCCCGGGGAGGGGCTTGGCTGCAGGGCAGGGCAGGGCAGCCTCCTCCCCCTCAGCCGCGCCCTCGCCTGCAGGTACCAGCAGATCCTGCACCGGAACCTGGTCTACCTGGCCACGATCGCCGATTCTAACCAGAACATGCAGTCCCTGCTGCCCGCCCCGCCAACCCAGAGCCTGGCGCTGGGCCCCGGAGGGCTGTCCCAGAGCGGCTCGGGCCAGGGCCTGCACTCGCAGGGCAGCCTCAGCGACGCCATCGGCGCGGGCCTGCCACCATCCTCCCTCATGCAGGCCCAGATCGGCAACGGTCCGAACCACGTGACCCTGCAGCAGACAGTGCAGAGCACGCTGCCCACCACCTCCATGAGCATGTCCGGCAGCGGCCACGGCTCGGGGCCCGGCTACAGCCACTCGGGCCCGGCCTCGCAGAGCATCCCCCTGCAGGGCCAGGGCGCCATCAGCAGCTACGTGTCCCGGGCCAACATCAACATGCAGTCCAACCCAGTGTCCATGATGCACCAGCAGGCAGCCTCGTCCCACTACAGCGCGGCACAGGGCGGGAGCCAGCACTACCAGGGCCAGTCCATGGCCATGATGGGCCAGAGCGGGCAGGCGGGCAGCATGATGGGGCAGCGGCCCATGGCGCCCTACCGGCCCTCCCAGCAAGGCTCGTCCCAGCAGTACCTGGGCCAGGAGGAGTACTACGGCGGCGAGCAGTACGGCCACGGCCAGGCCGCCTCGGAGCCCATGAGCCAGCAGTACTACCCTGACGGACATGGCGATTATGCCTACCAGCCGGCGTCCTACACGGAGCAGAGCTACGACCGGTCGTTTGAGGAGTCCACGCAGCACTACTACGAGGGCGGAAACTCACAGTACAGCCAGCAGCAGGCGGGGTACCAGCAGGGCACAGCCCAGCAGCAGACGTACTCCCAGCAGCAGTACCCCAACCAGCAGAGCTACCCCGGGCAGCAGCAAGGCTATGGGCCTGCCCAGGGCGCCCCCTCGCAGTACTCCAGCTACCAGCAGGGACAAGGCCAGCAGTACGGAAGCTACCGAGCGTCTCAGACGGGCCCGTCCGCCCAGCAGCAGCGGCCTTACGGCTACGAGCAGGCAAGCCTTCTGCGCGTTTCCAGACTCGCAGCCCCCGTGGCCAGTACGGAAATTACCAGCAGTAAAGGACAAACATTCTTATGGAGCCTTGCAGCGGCATGTCTGTCTGGGATGGACAGGCCAGTGACAGTTCTGATGAGCTGTGACCTGCGGGCTGCCCCTTCACCCCACGCAGTGTCTGCATGTGAAGCGTGCACATTTCACGTGGGGCAGGACGCCGAGCGTGCACCGCTGGTGCAAGACAGCGCTTTGATGGTGTGA

Related Sequences

bmy_20333T0 Protein

Length: 489 aa      View alignments
>bmy_20333T0
MTSSSSSGPHGCACESLEVEHVCQTQSIVPPALPGEGLGCRAGQGSLLPLSRALACRYQQILHRNLVYLATIADSNQNMQSLLPAPPTQSLALGPGGLSQSGSGQGLHSQGSLSDAIGAGLPPSSLMQAQIGNGPNHVTLQQTVQSTLPTTSMSMSGSGHGSGPGYSHSGPASQSIPLQGQGAISSYVSRANINMQSNPVSMMHQQAASSHYSAAQGGSQHYQGQSMAMMGQSGQAGSMMGQRPMAPYRPSQQGSSQQYLGQEEYYGGEQYGHGQAASEPMSQQYYPDGHGDYAYQPASYTEQSYDRSFEESTQHYYEGGNSQYSQQQAGYQQGTAQQQTYSQQQYPNQQSYPGQQQGYGPAQGAPSQYSSYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQASLLRVSRLAAPVASTEITSSKGQTFLWSLAAACLSGMDRPVTVLMSCDLRAAPSPHAVSACEACTFHVGQDAERAPLVQDSALMV*