Sequence detailsbmy_20345 (Coding sequence)

Part of scaffold_2407 (SequenceType object (1))

For more information consult the page for scaffold_2407 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RB1CC1ENSTTRG00000014733 (Bottlenosed dolphin)

Gene Details

RB1-inducible coiled-coil 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000013972, Bottlenosed dolphin)

Protein Percentage 96.11%
cDNA percentage 96.15%
Ka/Ks Ratio 0.22057 (Ka = 0.0125, Ks = 0.0568)

BT.55953ENSBTAG00000000878 (Cow)

Gene Details

RB1-inducible coiled-coil protein 1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000001169, Cow)

Protein Percentage 90.79%
cDNA percentage 89.45%
Ka/Ks Ratio 0.14035 (Ka = 0.0468, Ks = 0.3338)

Additional orthologs identified in other species via the OPTIC pipeline.

RB1CC1 (Human)   Rb1cc1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 4761 bp    Location:215051..258307   Strand:+
Raw sequence 
>bmy_20345
ATGAAGTTGTATGTATTTCTGGTGAACACTGGAACCACCCTGACATTTGACACTGAACTTACAGTGCAAACTGTGGCTGACCTGAAGCATGCCATCCACAGCAAGTACAAGATCGCTATTCAGCACCAGGTGTTGGTGGTCAACGGGGGAGAGTGCATGGCTGCAGACCGGAGAGTGTGCACCTACAGCGCCGGGACGGACACAAATCCAATTTTTCTTTTTAACAAGGAAATGATCTTATCTGAACGTCTACCTGCTATTCCTAAAACTACCTTTTCAACAGAAAATGACATGGAAATAAAAGTTGAAGAGTCCCTTATGATGCCTGCAGTTTTTCACACTGTTGCTTCAAGGACACAACTTGCAGTGGAAATGTATGAAGTTGCCAAGAAACTTTGCTCTTTCTGTGAAGGTCTGGTCCATGATGAACATCTTCAACACCAAGGCTGGGCTGCAATCATGGCCAATCTGGAGGATTGTTCAAATTCCTACCAAAAGCTACTTTTCAAATTTGAAAGCATTTATTCGAATTATCTGCAATCCGTAGAGGACATCAAGTTAAAACTTACTCATTTAGGAACTGCGGTTTCAGTCATGGCCAAGATTCCACTGTTGGAGTGCCTAACCAGACATAGTTACAGGGAATGTTTGGGAAGACTGGATTCCTTGCCTGAACGTGAAGGCTCAGAAAAGGCCGAGATGAAAACCTCCACTGAACTGGTGCTCTCTCCCGATATGCCTGCAACAATGAACAAACCCTCCTTAACCTCATTTCACAAGTCCGTGGAACATGTAGCCCCAGACACCACAGATGCTGAAAGTGGAAAAGAAATGAGGGAACCTTGTCCAAGTCCTGTCCAGCAGGACGAAGCTGCAGTAGATGCTAAAGACGGTGACCTGCCCGTTTTTAATGTTTCTTTGTTAGACTGGATCAACGTGCAGGATAGGCCTAATGACGTGGAATCCCTGGTCAGGAGGTGCTTTGACTCCATGAGCAGGCTTGATCCACGGATCATCCGACCCTTTATAGCAGAATGCCGTCAGACTATTGCCAATCTCGATAATCAGAACATGAAGGCCATCAAGGGGCTGGAGGACCGGCTGTACGCCCTGGACCAGATGATCGCCAGCTGCGGCCGACTCGTCAACGAGCAGAAAGAACTCGCTCAGGGATTTTTAGCTAATCAGATGAGAGCTGAAAACTTGAAGGATGCGTCTGTGTTACCTGATCTGTGCCTGAGTCATGCAAATCAGTTGATGATTATGTTGCAAAATCATAGAAAACTGTTGGATATTAAACAGAAGTGCACCACTGCCAAACAAGAACTAGCAAATAACCTTCATGTCAGACTGAAGTGGTGTTGCTTTGTGATGCTTCATGCTGATCAGGATGGAGAGAAGTTGCAGGCTTTGCTCCGCCTCGTTATAGAGCTCTTAGAGAGAGTCAAGATCGTTGAAGCTCTGAGTACAGTTCCTCAGATGTACTGCTTAGCTGCTGTTGAGGTTGTCAGGAGAAAAATGTTCATAAAACACTACAGGGAGTGGGCTGGTGCTTTAGTCAAAGACGGAAAGCGATTATATGAGGCTGAAAAGTCAAAAAGGGAATCCTTTGGGAAATTATTTAGGAAGTCCTTTTTAAGAAATCGTCTGTTTAGGGGATTGGACTCCTGGCCCCCATCCTTTTGTACACAGAAGCCTCGAAAGTTTGACTGTGAACTTCCAGATATTTCATTAAAAGATTTACAGTTTCTGCAATCATTTTGTCCTTCCGAAGTTCAGCCATTCCTCAGGGTGCCCTTACTTTGTGACTTTGACCCTCTACACCAGCATGTACTTGCTCTACATAATTTGGTAAAAGCAGCACAAAGTTTGGATGAAATGTCACAGACCATTACAGACCTACTGAGTGAACAAAAGGCGTCCGCGAGTCAGACCTCCCCACAGGCGGCTTCCTCACCCCGGATAGAAAGCACGACAGGAATCACAGCTACTACCTCACCCAGAACACCCCCTCCACTCACTGTGCGGGGCCCCTTGTGTCCTGCAGTCTGTCCCTTAGAGGAGTTGTCTCCGGATAGCATTGATGCACACACATTTGATTTTGAAACTATCCCCCATCCAAGCATAGGACAGAGTCTTCACCAGGCTTCGCTAGACTTGGATTCATTAGCAGAAAGTCCTGAGTCAGATTTCATGTCTGCAGTGAATGAGTTTGTCATAGAGGAAAACTTGTCATCTCCCAATCCTGTCAGTGACCCACAGAGTCCAGAGATGATGGTGGAATCCCTTTACTCCTCAGTCATCAATGCCATCGACAGCAGGCGAATGCAGGACACGAGTGCCCGAGGTCAGGAGCACTCGGGCCACCACGYGTCTCTCAGCGTCCAGTTGGAGAAGTGCCGTGTCACTGCCCACGACTCGCACCTCAGTGTACAAACCATAAAGGAGGACCTTTGCCACTTCCGAACRTTTGTGCAGAAGGAACAGTGTGACTTCTCAAATTCTTTAAAGTGTACAGCAGTAGAGATAAGAAACATTATTGAAAAAGTAAAATGCTCTTTGGAGATAACACTAAATGAAAGACACCAAAAAGAACTACAGTCTTTAAAAAGTGAATATGAGGGCAAACTTGCTGCGCTARTAAAAGAGAGTGAAGAAAATGAAAACAAAATCACAAAGCTGAAAGGAGACTTGGTGTGCCTTGAGGAGGTTTTACAAAATAAAGATAACGAATTTGCTTTGGTTAAACGTGAGAAAGAAGCTGTCATCTGCCTGCAGAAGGAAAAGGATCAGAAGTTGTTAGAGATGGAAAATATAATGCACACGCAACACTGTGAGATTGAAGAACTGAAGCAGTCACGAGAGACCGTGCTGGAAGACTTAAAGAAGCTCCGCGTGGAGAACGATGAGAAGCTCCGGCTGTTGAGGGCGGAGCTCCAGTGCCTGGAGCAGGGCCATCTGAAGGACTTAGAGGACACTCTGCAGGTCAGGCACACTCAGGAGCTCAAGAAGGTCATGACCGGCCACGAGGTCTGTTTGGAGAAATTAGAAAAGGAAAATCAACAAAGAATCGAGCAGATGCAAGATTCTCATGCCACAGCCATCCAGGAAAAAGAACAGCAGCTCCAGGAATTAAAACTCAAGGTTTCTGATTTGTCGGACATGAGATGTAAGTTAGAAGTTGAACTTGCCCTGAAGGAAGCAGAAACGGACGAAATAAAAATTTTGCTGGAAGAAAGCAGAGCCCAGCAGAAGGAGACCTTAAAATCTCTCGTCGAGCAAGAGACAGAACATTTGAGAACAGAGATAAGTAAACTAAACCAAAAGATTCAAGATGATAATGAAAATTATCAGGTGGGCTTGGCCGAACTAAGAACTTTAATGACAATTGAAAAAGATCAGTGCATTTCAGAGTTAATTAGTAGACATGAAGAAGAATCTGATATGCTTAGAGCCGAATTAAACAAAGTGACATCATTGCATCACCAAGCATTTGAAGTAGAAAAAGGCCTGAAAGAAGAATTGGCTGAACTGCAGAGTAACCTGGACTCAGAATTGAGTGCTCTTGAGAAACAAAAAGAGGAGACAATCACCCAGCAAGAAGAGAAATACGAAGCTATTATCCAGAAACTTGAAAAAGACAAAGAGGAATGTGTCATGAGGCACGAACAGGACCGAGAACAGCTGATTCAGAGGCTTAATTGTGAAAAAGAGGCAGCTATTGAGACTGCCCGTAAAGAAATGAACTTGGAAAGAGAAGCTGTTGAGAAGGAGTTGTTAGAAAAAATTAAACATCTTGAGAGTCAAATAGCAAAAAGTCATACCATTGAATCTACCAAAGAAGATTCTTCAAGCCTAGTCGCTGAACTTCAAGAAAAGCTCCAGGAAGAAAAAGCTAAGTTTCTAGAACAACTTGAAGAGCAGGAGAAAAGAAAAAACGAAGAAATGCAGAATGTGCGAACATCTTTGATTGCTGAACAACAGACCAATTTTAATACTGTTTTAACAAGAGAGAAAATGAGAAAAGAGAACATAATCAGTGATCTCAGTGACAAGCTGAAAAGCACGATGCAGCAGCAAGAGCGGGACAAAGATTTGATCGAGTCCCTGTCCGAGGACCGCGCGCGCTTGCTGGAGGAGAAGAAGAGGCTGGAGGAGGAGGTCAGCCGGCTGCGGGGCGGCGGGCCTGTCCCCTCCCCGGGGGTGGCCGCCGCCCCCGAGCTGTATGGGGCCTGTGCGCCCGAGCCCCCGGCGGAGGCCCCGGATGCCCTCGGCGAAGGCAGGCTGGACTCAGTGCTGGAGACCAGCATGATGTCTGTCCGAGAAAACGTCCACATGCTCTCTGAAGAAAGGCAGAGGATAATGCTGTTGGAACGAACACTACAGTTGAAAGAAGAAGAAAACAAGCGGTTGAATCAGAGACTGATGTCTCAGAGCATGTCCTCCGTATCCTCAAGGCATTCGGAAAAGATAGCTATTAGAGATTTTCAGGTGGGAGATCTGGTCCTCATCATCCTGGACGAACGCCATGACAATTACGTGCTCTTCACCGTGAGTCCCACCTTGTACTTCCTGCACTCGGAGTCGCTGCCTGCCCTGGACCTCAAACCAGCCTCAGGTGCATCTCGAAGACCATGGGTCCTTGGAAAAGTGATGGAGAAGGAGTACTGTCAGGCCAAAAAGGCACAAAACAGATTTAAAGTTCCTTTGGGGACAAAGTTTTACAGAGTGAAAGCTGTGTCATGGAATAAGAAAGTATAA

Related Sequences

bmy_20345T0 SequenceType object (3)

Length: 1587 aa      View alignments
>bmy_20345T0
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVCTYSAGTDTNPIFLFNKEMILSERLPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQLAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQSVEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEREGSEKAEMKTSTELVLSPDMPATMNKPSLTSFHKSVEHVAPDTTDAESGKEMREPCPSPVQQDEAAVDAKDGDLPVFNVSLLDWINVQDRPNDVESLVRRCFDSMSRLDPRIIRPFIAECRQTIANLDNQNMKAIKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLERVKIVEALSTVPQMYCLAAVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPLLCDFDPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASASQTSPQAASSPRIESTTGITATTSPRTPPPLTVRGPLCPAVCPLEELSPDSIDAHTFDFETIPHPSIGQSLHQASLDLDSLAESPESDFMSAVNEFVIEENLSSPNPVSDPQSPEMMVESLYSSVINAIDSRRMQDTSARGQEHSGHHXSLSVQLEKCRVTAHDSHLSVQTIKEDLCHFRTFVQKEQCDFSNSLKCTAVEIRNIIEKVKCSLEITLNERHQKELQSLKSEYEGKLAALXKESEENENKITKLKGDLVCLEEVLQNKDNEFALVKREKEAVICLQKEKDQKLLEMENIMHTQHCEIEELKQSRETVLEDLKKLRVENDEKLRLLRAELQCLEQGHLKDLEDTLQVRHTQELKKVMTGHEVCLEKLEKENQQRIEQMQDSHATAIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEESRAQQKETLKSLVEQETEHLRTEISKLNQKIQDDNENYQVGLAELRTLMTIEKDQCISELISRHEEESDMLRAELNKVTSLHHQAFEVEKGLKEELAELQSNLDSELSALEKQKEETITQQEEKYEAIIQKLEKDKEECVMRHEQDREQLIQRLNCEKEAAIETARKEMNLEREAVEKELLEKIKHLESQIAKSHTIESTKEDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLIAEQQTNFNTVLTREKMRKENIISDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKRLEEEVSRLRGGGPVPSPGVAAAPELYGACAPEPPAEAPDALGEGRLDSVLETSMMSVRENVHMLSEERQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPASGASRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV*