Part of scaffold_2443 (Scaffold)

For more information consult the page for scaffold_2443 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TWISTNB ENSTTRG00000010452 (Bottlenosed dolphin)

Gene Details

TWIST neighbor

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009907, Bottlenosed dolphin)

Protein Percentage 92.46%
cDNA percentage 95.64%
Ka/Ks Ratio 0.79074 (Ka = 0.0419, Ks = 0.0529)

TWISTNB ENSBTAG00000006721 (Cow)

Gene Details

DNA-directed RNA polymerase I subunit RPA43

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000044811, Cow)

Protein Percentage 83.66%
cDNA percentage 88.45%
Ka/Ks Ratio 0.31338 (Ka = 0.0866, Ks = 0.2763)

TWISTNB  (Minke Whale)

Gene Details

TWIST neighbor

External Links

Gene match (Identifier: BACU000461, Minke Whale)

Protein Percentage 96.52%
cDNA percentage 97.35%
Ka/Ks Ratio 0.42656 (Ka = 0.0185, Ks = 0.0433)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 609 bp    Location:163472..167727   Strand:+
>bmy_20353
ATGCTCAAGGGTACAGTTAATAAAGTGTCTTCCAGCCACATTGGCTGTTTAGTACACGGGTGCTTCAATGCCTCCATTCCTAAACCTGAGCAGATGCCAGCCGAGCAGTGGCAGACTCTGGAGATAAACGTGGGTGATGAACTAGAATTTGAAGTATTTCGTTTAGACTCAGATGCTGCTGGAGTATTCTGCATTCGGGGAAAACTAAGTATTGCTAGTTTACAAACCAAGTGCTCTGCAGTTTCTGAAGAAGTAACAGAAACTGGCACTGAAGAAGCTACTGAAAAACCTCGAAAGAAGAAAAAGAAAAAGAAGAAAGACCCAGAGCCATATGAAGTGGAAGGTGATACCACAGAGCTAGCAGATTTTGCAGATGTTACCATGAAGGAAGAGACAGACCTGCAGATTAATAACAATGTGAATGGCCTCTGGGAGGAAGAGCCAAAGAAGAAGAAGAAGAAGAAAAAGCACCAGGACCCTGTTTTCCAAGGCAGTGACTCTAGTGGTTACCAAAGTGACCATAAAAAGAAAAAAAAGAAAAAGCACAGTGAGGAGGCTGAATTTACACCACTTTTGGAACATGCACCTAAAAAGAAAAGGGAAAAGTAA

Related Sequences

bmy_20353T0 Protein

Length: 203 aa      View alignments
>bmy_20353T0
MLKGTVNKVSSSHIGCLVHGCFNASIPKPEQMPAEQWQTLEINVGDELEFEVFRLDSDAAGVFCIRGKLSIASLQTKCSAVSEEVTETGTEEATEKPRKKKKKKKKDPEPYEVEGDTTELADFADVTMKEETDLQINNNVNGLWEEEPKKKKKKKKHQDPVFQGSDSSGYQSDHKKKKKKKHSEEAEFTPLLEHAPKKKREK*