Part of scaffold_2477 (Scaffold)

For more information consult the page for scaffold_2477 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

CNOT6 ENSTTRG00000009363 (Bottlenosed dolphin)

Gene Details

CCR4-NOT transcription complex, subunit 6

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000008882, Bottlenosed dolphin)

Protein Percentage 96.36%
cDNA percentage 97.04%
Ka/Ks Ratio 0.9999 (Ka = 0.0306, Ks = 0.0306)

CNOT6 ENSBTAG00000017362 (Cow)

Gene Details

CCR4-NOT transcription complex subunit 6

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000023088, Cow)

Protein Percentage 95.56%
cDNA percentage 94.68%
Ka/Ks Ratio 0.29484 (Ka = 0.0345, Ks = 0.1172)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1497 bp    Location:254503..170969   Strand:-
>bmy_20405
ATGGCAGGCATGCCCAAAGAAAAATATGAGCCCCCTGACCCTCGGAGGATGTACACAATTATGTCCTCTGAGGAAGCAGCAAATGGAAAGAAATCACATTGGGTGGAGCTTGAAATAAGTGACATTGCAAAGCTTCACAATCTGGTGTATCTGGACCTGTCCTCTAATAAAATCCGGAGTTTACCGGCAGAACTCGGAAACATGGTATCACTCAGGGAACTCCATTTAAATAACAACCTGTTACGAGTTCTACCTTTTGAGCTGGGAAAACTGTTTCAGTTGCAGACTTTAGGCCTGAAAGGAAATCCACTTACCCAGGATATATTGAACCTCTATCTGGAACCAGATGGAACAAGAAGGCTACTGAACTATTTGCTTGATAATTTGGCAGGTACTGCAAAAAGAATTTCAATAGAACAACCACCTCCAAGATCTTGGATTATGTTACAAGAACCAGACAGAACACGGCCAACTGCCTTGTTTTCTGTCATGTGCTATAATGTTCTTTGTGATAAATATGCGACCCGGCAGTTATATGGCTACTGTCCATCATGGGCACTAAATTGGGACTACAGGAAAAAGGCCATTATTCAAGAAATCTTGAGTTGCAATGCTGATGTCATAAGTCTTCAGACTGAGAACAACTTAAATGGACATGGGAAGCTTGGTGTTAAGTGTGGAGGATTTTCCATAATATTTACTTTGGTTCAGAAACACACTGTTGAATTTAATCAGCTAGCAATGGCAAATTCAGAAGGGTCTGAAGCTATGCTGAACAGAGTCATGACAAAAGATAACATTGGAGTTGCTGTACTGCTAGAACTTCGAAAGGAATTGATTGAAATGTCATCTGGAAAGCCACATCTTGGAACAGAAAAACAACTTATTCTCGTGGCTAATGCTCATATGCACTGGGACCCCGAATACTCTGATGTGAAGTTGGTTCAAACAATGATGTTCCTCTCAGAAGTGAAGAACATCATTGATAAAGCTTCGAGAAGCCTCCAGTCCAGTGCATTGGGAGAATTTGGAACTATTCCACTGGTGTTGTGTGCAGATCTTAATTCTTTGCCGGACTCTGGTGTTGTGGAATATTTGAGCACTGGTGGAGTAGAAACAAATCATAAAGACTTTAAGGAACTGAGATATAATGAAAGTCTTACAAACTTCAGCTGTAATGGGAAAAATGGGACAACCAATGGAAGGATCACTCATGGTTTCAAGTTAAAGAGTGCCTATGAGAGTGGCCTGATGCCTTACACAAATTACACGTTTGATTTTAAGGGTATAATTGACTACATCTTCTATTCTAAACCTCAGCTGAACACTTTAGGCATCCTGGGACCTCTGGACCACCATTGGCTAGTTGAGAACAATATCAGCGGCTGCCCACACCCACTCATCCCCTCTGACCACTTCTCACTTTTTGCACAACTGGAGCTCTTACTGCCTTTCCTGCCCCAAGTTAACGGCATTCACCTTCCTGGCAGGAGGTAG

Related Sequences

bmy_20405T0 Protein

Length: 499 aa      View alignments
>bmy_20405T0
MAGMPKEKYEPPDPRRMYTIMSSEEAANGKKSHWVELEISDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPLTQDILNLYLEPDGTRRLLNYLLDNLAGTAKRISIEQPPPRSWIMLQEPDRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADVISLQTENNLNGHGKLGVKCGGFSIIFTLVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLQSSALGEFGTIPLVLCADLNSLPDSGVVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYESGLMPYTNYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLELLLPFLPQVNGIHLPGRR*