Part of scaffold_2457 (Scaffold)

For more information consult the page for scaffold_2457 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

RFX7 ENSTTRG00000010051 (Bottlenosed dolphin)

Gene Details

regulatory factor X, 7

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000009535, Bottlenosed dolphin)

Protein Percentage 82.59%
cDNA percentage 82.56%
Ka/Ks Ratio 0.25264 (Ka = 0.0169, Ks = 0.0668)

RFX7 ENSBTAG00000000565 (Cow)

Gene Details

DNA-binding protein RFX7

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000000738, Cow)

Protein Percentage 93.56%
cDNA percentage 92.26%
Ka/Ks Ratio 0.15104 (Ka = 0.0347, Ks = 0.2294)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 3918 bp    Location:215403..226548   Strand:+
>bmy_20408
ATGTCTTACTGCAAGTTTTTGCTAGTAAAAGCAGTAGTACTGTGTACCCTGAGGATGAAACAAGCTGAGAGCTATTGTGACAATCTTGGTTACCATCCATTAAGTGCTGCTGACTTTGGAAAGATCATGAAAAATTTGGAAGGAGCTGAACCTTCTGGGCAGCTTCAAAATATTGATGAGGAAGTTATCACTTCTGCTTGCCGTCTTGTGTGTGAGTGGGCCCAGAAAGTGTTAAGCCAGCCATTTGACACGGTCTTGGAATTAGCCCGCTTCCTTGTAAAAAGTCACTATATAGGCACCAAGTCGATGGCAGCTCTAACTGTAATGGCCGCAGCACCACCAGGAATTAAAGGAATTACCCAGCCTTCTGCTTTTATACCTACAGCTGAAAGTAATTCCTTTCAGCCCCAAGTGAAGACTCTGCCATCTCCTATTGACGCTAAACAGCAATTGCAACGGAAAATCCAGAAGAAGCAACAAGAACAGAAACTACAATCCCCTTTGCCAGGAGAATCCTCAGCAAAAAAATCGGAAGGCGCTACAACCAATGGAGTGACTAGTCTTTCTAATGGAAATCCTGCAATCCTCTCTCCTCAGCCTATCGGTATCGTTGTGGCAGCTGTCCCTAGTCCCATTCCGGTCCAGCGGACCAGGCAACTGGTAACTTCACCAAGTCCAATGAGTTCTTCTGACGGCAAAGTTCTTCCCCTCAATGTACAGGTGGTCACTCAGCACATGCAGTCTGTGAAGCAGGCACCAAAGACTCCTCAGCACGTCCCAGCCAGTCCTGGGGGGGATCGCTCTGCTCGGCACCGCTACCCTCAGATCTTACCCAAACCAGCCAACACCAGTGCCCTCACCATCCGCTCTCCAACTACTGTCCTCTTTACTAGTAGTCCCATCAAAACCGCTGTTGTACCCACGTCACACGTGAGTTCTCTAAATGTGGTGAAAATGACAGCAATATCCCTCACACCCAGCAACAGTAGTGCCCCTCTGAAACATTCTGCCTCAGTAAACAGTGCTGCAGGAACAACGGAAGAATCAAGGACCATTCCACAGATCAAGAACGGTTCTGTTGTTTCACTTCAGTCTCCTGGATCCAGGACCAGCAGCACCGGGGGACCATCTGCTGTGGAAGTCAAAATGGAACCTGAGATGTCATCAGATGAGCATCCTGTACAGTGCCAAGAGAACTCTGATGGGGCTGACGTGCCCAAAACAACACCTAGTGCCCTCTCGGGGCAGAAAAGTAATACAGAGGGAGTAGTGCAAAAACCTTCAAATGAAGGTGTTATTGAAATAAAAGCAACTAAGGTCTGTGACCAGAGGACCAAATGTAAAAATCGCTGTAATGAAATTCTGCCAGGCACTTCAACAGGCAATAATCAAAGCACTATCACTCTCTCAGTTGCCACTCAGAACTTAACTTTCACCAGCACCAGCTCACCATCTAATGGTGACTCAATAAATAAAGACCCTAAATTATGCACTAAAAGTCCAAGAAAGCGGCTGTCTTCTGCATTGCAAGAGTCCCAGGTGCCTCCTGTAAAGAAACCAATCGTGGAACAGCTTTCTGCAGTTATCTCGGAAGGTCAGAAACCAGGCAGTGTTAAGAAGGACCAAAAGGTTCCGCATTCAGGGAAAACGGAAAGTTCAGCAGCAGGTTCTCAGATTCCTAGCAAGGTATCAACAAATGTTAACTCGCACGTAGTGGCAAGTCAACCCTTGAAGTCCTCTGCTCTTGTTACCAGTGATTTAGCTTCAGAGCAGCAAACCACACCATCATCATCTCCAGATATAAAAGTAAAGCTTGAAGGCAGTGTCTTTCTCTTGGACAGTGATTCAAAATCGCATGGCAGCTTTAACCCAAATGAATGGCAACAGGTCACTAAGGATTCTGAGTTTATATCTGCCGGCTGTGAACAACAGCAAGATATCAGTGTTATGACAGTTCCTGAGCACTCTGATATCAATGACTTAGAGAAGTCTGTCTGGGAATTAGAAGGAATGCCACAGGACACGTATTCCCAGCAACTACACAGCCAGATACAAGAATCTTCTTTGAGTCAACTGCAAGCACAGTCTTCAGATCAGTTACCTCTACAGTCCGAACTGAAGGAGTTCGAGCCTTCTGTTTCCCAAGCAAATGAAAGCTACTTTCCTTTCGATGAGGAGCTGACACAGGACAGTATTGTAGAGGAGCTGGTGCTCATGGAGCAACAGATGTCAATGAACAATTCTCACGCTTACGGTAACTGTTTGGGAATGACCCTTCAGAGTCAGTCCGTGACTCCAGGTGCGCCAGCGTCATCTCACGCCCCCAGCACCCACTTCTATCACCCCATCCGTAGCAATGGCACCCCGATCCCCACCCCCACCCCGACCCCCACCCCGACCCCGACCCCCACCCCCACCCCCACCCCCACATCTGAAGTGGTTGCCGGGTCTCAGAGCCTGTCACGGGAGAGCCCTTGCTCCAGGTTGGCCCAGACCACGCCCGTGGATAGTGCTTTAGGAAGTAGCCGACATACACCCATCGGTACTCCCCATTCTAACTGCAGCAGCAGTGTCCCTCCCAGCCCCGTGGAATGCAGGAATCCATTTGCATTTACCCCAATAAGCTCCAGTATGGCATATCATGACGCCAGCATTGTCTCAAGTAGTCCTGTGAAACCGATGCAGAGACCCATGGCCACACACCCYGACAAAACCAAGCTTGAATGGATGAATAATGGGTACAGTGGGGTTGGTAATTCATCCGTTTCTGGCCATGGCATTCTCCCAAGCTATCAGGAACTAGTGGAAGACCGTTTCAGGAAACCTCATGCTTTTGCTGTGCCTGGACAGTCTTACCAGTCTCAATCCAGACATCATGACACTCATTTTGGTCGTCTGACTCCTGTCTCTCCTGTGCAGCATCAAGGTGCCACTGTAAGTAACACCAACAAACAGGAGGGCTTTGCGGTCCCTGCCCCTCTTGATAATAAAGGAACTAACTCTTCGGCCAGCAGCAACTTCCGGTGCCGAAGCGTGAGCCCTGCTGTTCATCGCCAACGTAATCTTAGTGGAAGCACCCTCTACCCAGTATCTAATATCCCCCGATCTAATGTGACCCCCTTTGGAAGTCCAGTAACCCCTGAAGTTCATGTTTTCACAAACGTTCACACGGATGCATGTGCCAACAACATAGCTCAAAGAAGTCAGTCGGTTCCATTGACAGTCATGATGCAAACAGCCTTCCCAAATGCTCTTCAGAAGCAAACAAACAGTAAAAAAATAACCAATGTTTTGTTGAGTAAACTTGATTCTGACAATGATGATGCAGTGAGAGGTTTGGGCATGAACAACCTGCCCTCCAATTATACAGCCCGGATGAATCTCACTCAGATTTTGGAAACTTCCACTGTCTTTCCTAGTGCCAATCCGCAGAATATGATCGATTCCAGCACTTCTATTTATGAATTCCAAGCACCATCTTACCTCACCAAAAGTAATAGCACCGATCAGATCAGTTTTTCTCCTGGCGATAATCAAGCACAATCAGAAATTGGAGAGCAACAATTAGATTTCAGTAGCACTGTTAAAGACCTGTTGAGTGGAGACAGCTTGCAAACCAACCAGCAGCTGGTAGGTCAGGTAGCATCTGATCTCACTAATCCTGCGTCTGATTTTTCTAGCGACATCAGGTTGTCTTCTGAGCTCTCAGGCAGCATCAATGATTTGAACGCTTTAGATCCAAATCTACTGTTTGATCCAGGTCGTCAGCAGGGACAAGATGATGAAGCTACACTGGAAGAATTAAAGAATGACCCATTATTTCAACAAATTTGCAGTGAATCCATGAGCTCTATGACTTCATCAGGTTTTGAATGGATAGAAAGCAAGGACCACCCTACTGTTGAAATGTTGGGTTAA

Related Sequences

bmy_20408T0 Protein

Length: 1306 aa      View alignments
>bmy_20408T0
MSYCKFLLVKAVVLCTLRMKQAESYCDNLGYHPLSAADFGKIMKNLEGAEPSGQLQNIDEEVITSACRLVCEWAQKVLSQPFDTVLELARFLVKSHYIGTKSMAALTVMAAAPPGIKGITQPSAFIPTAESNSFQPQVKTLPSPIDAKQQLQRKIQKKQQEQKLQSPLPGESSAKKSEGATTNGVTSLSNGNPAILSPQPIGIVVAAVPSPIPVQRTRQLVTSPSPMSSSDGKVLPLNVQVVTQHMQSVKQAPKTPQHVPASPGGDRSARHRYPQILPKPANTSALTIRSPTTVLFTSSPIKTAVVPTSHVSSLNVVKMTAISLTPSNSSAPLKHSASVNSAAGTTEESRTIPQIKNGSVVSLQSPGSRTSSTGGPSAVEVKMEPEMSSDEHPVQCQENSDGADVPKTTPSALSGQKSNTEGVVQKPSNEGVIEIKATKVCDQRTKCKNRCNEILPGTSTGNNQSTITLSVATQNLTFTSTSSPSNGDSINKDPKLCTKSPRKRLSSALQESQVPPVKKPIVEQLSAVISEGQKPGSVKKDQKVPHSGKTESSAAGSQIPSKVSTNVNSHVVASQPLKSSALVTSDLASEQQTTPSSSPDIKVKLEGSVFLLDSDSKSHGSFNPNEWQQVTKDSEFISAGCEQQQDISVMTVPEHSDINDLEKSVWELEGMPQDTYSQQLHSQIQESSLSQLQAQSSDQLPLQSELKEFEPSVSQANESYFPFDEELTQDSIVEELVLMEQQMSMNNSHAYGNCLGMTLQSQSVTPGAPASSHAPSTHFYHPIRSNGTPIPTPTPTPTPTPTPTPTPTPTSEVVAGSQSLSRESPCSRLAQTTPVDSALGSSRHTPIGTPHSNCSSSVPPSPVECRNPFAFTPISSSMAYHDASIVSSSPVKPMQRPMATHPDKTKLEWMNNGYSGVGNSSVSGHGILPSYQELVEDRFRKPHAFAVPGQSYQSQSRHHDTHFGRLTPVSPVQHQGATVSNTNKQEGFAVPAPLDNKGTNSSASSNFRCRSVSPAVHRQRNLSGSTLYPVSNIPRSNVTPFGSPVTPEVHVFTNVHTDACANNIAQRSQSVPLTVMMQTAFPNALQKQTNSKKITNVLLSKLDSDNDDAVRGLGMNNLPSNYTARMNLTQILETSTVFPSANPQNMIDSSTSIYEFQAPSYLTKSNSTDQISFSPGDNQAQSEIGEQQLDFSSTVKDLLSGDSLQTNQQLVGQVASDLTNPASDFSSDIRLSSELSGSINDLNALDPNLLFDPGRQQGQDDEATLEELKNDPLFQQICSESMSSMTSSGFEWIESKDHPTVEMLG*