Part of scaffold_2478 (Scaffold)

For more information consult the page for scaffold_2478 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

TSPAN5 ENSTTRG00000001210 (Bottlenosed dolphin)

Gene Details

tetraspanin 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000001136, Bottlenosed dolphin)

Protein Percentage 85.02%
cDNA percentage 87.99%
Ka/Ks Ratio 0.59448 (Ka = 0.112, Ks = 0.1884)

TSPAN5 ENSBTAG00000012343 (Cow)

Gene Details

Tetraspanin-5

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000016375, Cow)

Protein Percentage 80.3%
cDNA percentage 82.83%
Ka/Ks Ratio 0.48131 (Ka = 0.1634, Ks = 0.3395)

TSPAN5  (Minke Whale)

Gene Details

tetraspanin 5

External Links

Gene match (Identifier: BACU010598, Minke Whale)

Protein Percentage 94.09%
cDNA percentage 94.39%
Ka/Ks Ratio 0.62808 (Ka = 0.0517, Ks = 0.0822)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1011 bp    Location:56253..7588   Strand:-
>bmy_20422
ATGCAGCTGGGAAAGTGGAAACGGCTTGTTCTTTCTCCAAATTCTCAAACCTTGTTTGGAAAGTCACAGTTAAGGCAGGAAATATTGGAGCAAGATTATAAAGGAAATTCCCTTTCGGATTTATTAGCCGTTGCCTACAAAGTGTCAGTAACTCCCCGCTGCGAATGGCTAAGACCTCGCCAGGTGGACCCTTCTCAGATTTCCCTGAAACCGGAGAGAGTAACCACCCTCACTCTTGTTTTCTCCACGCCCCCCTCTCAGTGGACAGCTTCCCTGACATTTAACTTGATCAAGATAAAACTGACCCCGCCTCCTGGCACCCTGTTGTGTGTTCTCTTCCGCTTCCAGGGAGTTCTGTCCAACATCTCTTCCATCACCGATCTTGGCGGCTTTGACCCAGTTTGGCTCTTCCTCGTGGTAGGAGGAGTGATGTTCATTCTGGGATTTGCTGGGTGCATTGGAGCTCTACGGGAAAACACTTTCCTTCTCAAGTTTTTTTCTGTATTCCTGGGAATTATTTTCTTCCTGGAGCTCACTGCCGGGGTTCTGGCATTTGTTTTCAAAGACTGGATCAAAGACCAGCTGTATTTCTTTATAAACAACAACATCAGAGCGTACAGGGATGACATTGATTTGCAAAACCTCATAGACTTCACCCAGGAATATTGGCAGTGCTGTGGGGCTTTTGGAGCTGATGATTGGAACCTAAATATTTACTTCAATTGCACAGATTCCAATGCAAGTCGAGAGCGATGCGGCGTGCCCTTCTCCTGCTGTACTAAAGACCCCGCGGAAGATGTCATCAACACTCAGTGTGGCTATGATGCCAGGCAAAAACCAGAAGTCGATCAGCAGATTGTAATCTACACGAAAGGCTGTGTGCCCCAGTTTGAGAAGTGGTTGCAGGACAACTTAACCATTGTGGCTGGTATTTTCATAGGCATTGCATTGCTACAGGTAAGATGGATGTTGCAGGGAAATGATGCCCTGGGAGAGCCCTCACCAGGATAG

Related Sequences

bmy_20422T0 Protein

Length: 337 aa      View alignments
>bmy_20422T0
MQLGKWKRLVLSPNSQTLFGKSQLRQEILEQDYKGNSLSDLLAVAYKVSVTPRCEWLRPRQVDPSQISLKPERVTTLTLVFSTPPSQWTASLTFNLIKIKLTPPPGTLLCVLFRFQGVLSNISSITDLGGFDPVWLFLVVGGVMFILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCTDSNASRERCGVPFSCCTKDPAEDVINTQCGYDARQKPEVDQQIVIYTKGCVPQFEKWLQDNLTIVAGIFIGIALLQVRWMLQGNDALGEPSPG*