Sequence detailsbmy_20427 (Coding sequence)

Part of scaffold_2449 (SequenceType object (1))

For more information consult the page for scaffold_2449 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

MYO5CENSTTRG00000004710 (Bottlenosed dolphin)

Gene Details

myosin VC

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000004477, Bottlenosed dolphin)

Protein Percentage 80.06%
cDNA percentage 80.96%
Ka/Ks Ratio 0.32555 (Ka = 0.0176, Ks = 0.054)

MYO5CENSBTAG00000003763 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004905, Cow)

Protein Percentage 82.59%
cDNA percentage 83.98%
Ka/Ks Ratio 0.33002 (Ka = 0.1309, Ks = 0.3967)

MYO5C (Minke Whale)

Gene Details

myosin VC

External Links

Gene match (Identifier: BACU016372, Minke Whale)

Protein Percentage 95.61%
cDNA percentage 96.31%
Ka/Ks Ratio 0.43619 (Ka = 0.0301, Ks = 0.069)

Additional orthologs identified in other species via the OPTIC pipeline.

MYO5C (Human)   Myo5c (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 3177 bp    Location:113361..206700   Strand:+
Raw sequence 
>bmy_20427
ATGGGTGTAACTGAGGTGGAACCAGTGCTGAAATTAAGCCTTTCTTATTCTGTTGGTCAGTACAACAGGGTTTGGATTCCTGATCCTGAAGAAGTTTGGAAGTCTGCCGAAATAGCGAAGGACTATAGAGTTGGTGACAAAGTCCTGCGTCTCCTGCTGGAGGATGGAACGGAGCTGGATTATTCCGTTGATCCAGAATCTCTGCCTCCACTTCGGAATCCTGACATCCTCGTGGGTGAGAATGACCTCACGGCCCTCAGCTATCTCCACGAGCCCGCTGTGCTCCACAATCTCAGAATCCGCTTTGCAGAATCCAAACTCATTTACACCTACAGTGGAATCATCCTGGTGGCCATGAATCCTTACAAGCAGCTGCCGATATATGGAGATGCCATCATCCACGCCTACAGCGGGCAGAACATGGGCGATATGGACCCGCACATATTTGCTGTGGCAGAAGAGGCATACAAGCAGATGGTCAGAAATAATAAAAATCAGTCAATAATTGTAAGCGGGGAGTCGGGTGCTGGAAAGACAGTATCTGCTCGCTATGCCATGAGGTACTTCGCCACCGTCAGCAAGTCCAGCACTAATGCTCACGTGGAAGACAAGGTTCTGGCGTCGAACCCCATAACTGAGGCTGTTGGAAATGCCAAGACCACCCGCAATGACAACAGCAGTCGGTTTGGGAAATACACAGAAATCAGTTTTGATGAGAGAAATCAAATTATAGGAGCCAACATGAGAACTTACCTGCTGGAGAAATCCAGAGTTGTCTTTCAATCAGAAAATGAGCGAAATTACCACATTTTCTATCAGCTTTGTGCATCTGCACAGCAGTCGGAATTTAAACATCTTAAATTGGGGAGTGCAGAAGAATTTAATTATACGAGAATGGGGGGCAGTACCATCATTGAGGGCGTGAATGACAGAGCCAACATGATAGAGACTCAGAAGACCTTCACACTACTGGGTTTCAAGGAAGATTTTCAGATGGATGTTTTTAAGATCCTGGCAGCCATCCTACATCTGGGCAATGTGCAGATCATAGCAGTGGGCAACGAGAGATCRGCAGTCAGTGAGGACGACAGTCACCTGGAGGTGTTCTGTGAGCTCCTGGGCCTGGAGAGTGGCAGAGTCGCTCAGTGGCTGTGTAATCGCAAGATCATCACAAACTCCGAGACGGTGGTGAAACCCATGACCAGGTCCCAGGCCGTCAACGCCAGGGACGCGCTGGCCAAAAAGATCTACGCTCAGCTGTTTGACTTCATTGTGGAGAGAATTAACCAAGCCTTGCAGTTTTCAGGCAAGCAGCACACTTTTATTGGTGTTTTGGACATTTATGGTTTCGAAACCTTTGATGCGAACAGCTTTGAACAGTTTTGCATCAATTAYGCTAACGAAAAGCTGCAACAGCAGTTTAACCTGCATGTCTTTAAACTTGAACAAGAAGAGTATATGAAGGAAGATATTCCTTGGACTCTGATAGATTTTTATGACAACCAAACAGTTATTGACCTGATTGAAGCAAAAATGGGTATTTTGGAGTTACTGGATGAAGAATGCTTGTTACCACATGGGACTGATGAAAACTGGCTTCAAAAGCTGTATAATAATTTTGTCAACAAGAACTCTTTGTTTGAAAAACCCAGAATGTCAAACACATCCTTTATCATCCAGCACTTTGCTGATAAGGTAGAGTATAAATGTGAAGGTTTCCTTGAGAAGAACAGAGACACCGTCTATGACATGCTGGTTGAAATCCTGAGAGCCAGCAAGTTTCATCTCTGTGCCAACTTTTTTCAAGAAAATCCGGTTCCTTCTTCACCTTTCGGTTCAGCGATCACAGTTAAATCTGCAAAGCCAGTCATCAAGCCGAACAGCAAGCATTTCCGGAGCACCGTGGGGAGCAAGTTCCGCAGCTCTCTGTACTTGCTCATGGAGACCCTCAATGCCACCATGCCCCACTACGTTCGATGCATCAAACCAAATGATGAGAAATTGCCCTTTGAGTTTGACTCCAAAAGAATTGTTCAGCAGCTGCGAGCCTGTGGCGTTTTAGAAACCATTCGCATTAGTGCGCAGAGCTACCCTTCTAGGTGGACGTACATCGAGTTCTACAGCCGCTTTGGGATCCTCATGACCAAGCAGGAGCTTTCATTCAGCGATAAAAAGGAGGTGTGCAAAGTGATTTTACACAGGCTCGTCCAGGATTCTAATCAGTACCAGTTCGGTAAAACCAAAATTTTCTTCAGAGCAGGGCAAGTGGCTTATTTAGAGAAACTCCGGTTGGATAAACTGAGGCAGGGTTGTGTTGTGATACAAAAGCACATCCGTGGCTGGCTCCAGAGAAAAAAATTCCTCCGAGAGAGACGAGCGGCCCTGATCATCCAGCAGTACTTCCGGGGTCAGCAAACCGTGAGGAAAGCTGTTACCGCCACAGCCTTAAAAGAAGCGTGGGCAGCCATAATCATTCAGAAGTACTGTCGTGCGTATCTTGTCCGCAACTTGTACCAACTGATTCGTGTGGCCGCCATCACCATCCAGGCCTACACCCGAGGATTCCTGGCGAGGAGGAGGTATCGAAAGATGCTGGAGGAACACAAGGCTGTCATCCTTCAGAAGTATGCCCGGGCGTGGCTGGTCAGACGCAGATTCCAAAATATCCGACGATTTGTGCTCAACATTCAGCTTACTTACAGAGTTCAGCGTTTGCAGAAAAAGCTAGAAGACCAGAACAGAGAGAACCATGGGCTGGTGGAGAAGCTGACCAGCTTGGCTGCCCTTCAGGCCGGTGACATGGAGAAGATTCAGAAACTGGAATCAGAGCTGGACAGAGCAGCTACCCACAGGCAGAATTACGAGGAGAAGGGGAAGAGGTACAAGGCTTCCGTGGAAGAGAAATTGGCAAAGCTTCAGAAGCGTAATTCAGAATTGGAAATACAAAAAGAACAAATACAGCTGAAGCTCCAAGAGAAGACTGAGGAGTTGAAAGAAAAAATGGACAACCTCACCAAGCAGCTCTTTGATGATGTGCAGAAAGAAGAACGACAGAGAATGTATGAAATCTCATTTGCCTTAAAGCCACTGCTTTTTTCTCTCTCTGCTATTTTCTGTTTTGCTTCTCAGCTTGCAGTCCTCATCAGCCCTCACCTGGCAGCTCCTTTTGGTCCCTGA

Related Sequences

bmy_20427T0 SequenceType object (3)

Length: 1059 aa      View alignments
>bmy_20427T0
MGVTEVEPVLKLSLSYSVGQYNRVWIPDPEEVWKSAEIAKDYRVGDKVLRLLLEDGTELDYSVDPESLPPLRNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIFAVAEEAYKQMVRNNKNQSIIVSGESGAGKTVSARYAMRYFATVSKSSTNAHVEDKVLASNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTYLLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGSTIIEGVNDRANMIETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQIIAVGNERSAVSEDDSHLEVFCELLGLESGRVAQWLCNRKIITNSETVVKPMTRSQAVNARDALAKKIYAQLFDFIVERINQALQFSGKQHTFIGVLDIYGFETFDANSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDIPWTLIDFYDNQTVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPRMSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCANFFQENPVPSSPFGSAITVKSAKPVIKPNSKHFRSTVGSKFRSSLYLLMETLNATMPHYVRCIKPNDEKLPFEFDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRFGILMTKQELSFSDKKEVCKVILHRLVQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCVVIQKHIRGWLQRKKFLRERRAALIIQQYFRGQQTVRKAVTATALKEAWAAIIIQKYCRAYLVRNLYQLIRVAAITIQAYTRGFLARRRYRKMLEEHKAVILQKYARAWLVRRRFQNIRRFVLNIQLTYRVQRLQKKLEDQNRENHGLVEKLTSLAALQAGDMEKIQKLESELDRAATHRQNYEEKGKRYKASVEEKLAKLQKRNSELEIQKEQIQLKLQEKTEELKEKMDNLTKQLFDDVQKEERQRMYEISFALKPLLFSLSAIFCFASQLAVLISPHLAAPFGP*