Sequence detailsbmy_20450 (Coding sequence)

Part of scaffold_2495 (SequenceType object (1))

For more information consult the page for scaffold_2495 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

GFI1ENSTTRG00000000082 (Bottlenosed dolphin)

Gene Details

growth factor independent 1 transcription repressor

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000000074, Bottlenosed dolphin)

Protein Percentage 98.33%
cDNA percentage 98.56%
Ka/Ks Ratio 0.13708 (Ka = 0.0069, Ks = 0.0502)

GFI1ENSBTAG00000016723 (Cow)

Gene Details

zinc finger protein Gfi-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000022231, Cow)

Protein Percentage 96.19%
cDNA percentage 95.79%
Ka/Ks Ratio 0.09125 (Ka = 0.0161, Ks = 0.1762)

Additional orthologs identified in other species via the OPTIC pipeline.

GFI1 (Human)  

Genome Location

Sequence SequenceType object (2)

Length: 1584 bp    Location:213308..220441   Strand:+
Raw sequence 
>bmy_20450
ATGCCGCGTTCGTTCCTGGTTAAGAGCAAAAAGGCTCACAGTTACCACCAGCCGCGCTCCCCGGGACCCGACTATTCCCTCCGCCTGGAGAATGTACTGGCGCCAGGCGGAGCAGGTGCGGGGCGTGCGCGGGTCGGGCGGGGCCGCTCCCGGGGCCATAGACTCTGTGTCCCGCCACACCATCCCCCAGGAACCGGGAAGGGCGGTCCCGAAGCCCCTTTGCTGCCTTTTTTTGTTACCTACCTTTCAGGTTCCTTCCGGGCTTGTCGCCTAGGTGCCAAGGCCTCTCTGCTCCCGCCCTTGGATCCGGGAGGGTTCCGGCCGGGTCTGGGGAGAGCTGAGGGAGCCCAGGTGCCACGGTCTGGGGGGCGCCGCTTCAGAACCATCGGGCCCATCCAGACCCAACCTGAGCCCCTATCCTGCCTCCTCTCCGCAGACAGCACCTCGAGCACAGGTGGAGCGAAGGCGGAGCCCCGGGGCCGTTTTTCCCCCGAGTCTCAGCTGACCGAAGCCCCCGACAGAGCCTCCACGTCCCCCGGCAGCTGTGAGGGCAGCGTCTGCGATCGGAGCTCGGAGTCTGAGGACTTCTGGAGGCCTCCGTCGCCTTCTGTGTCTCCAGCCTCGGAGAAGTCGGTGTGCCCCTCGCTGGACGAAGTTCAGCCCTTCTCCCTGCCCTTCAAGCCGTACTCGTGGAGCGGTCTGGCGGGTTCCGACCTGCGGCACCTGGTGCAGAGCTACAGGCCATGCGCGGCCCTGGAGCGCGGCGCCGGCCTGGGCCTCTTCTGCGAGCGCGCCCCGGAGCCAGGCCACCCCGCGGCGCTCTACGGCCGGGAGCGGGCTGCTGGCGGCGCGGGGGCCGGGGCGCCCGCGGGAGGCAGCGCAGGAGGCGGAGCTGCCGGCGGCGCGGGCCTGGGGCTCTACCGCGACTTTGGGCCCGCGGCGGCAGGACTGTACGAGAGGCCGGCGACCGGCGGGCTGTACCCGGAGAGCGGCCACGGGCTGCACGGCGACAAGGGCACCGGAGTCAAGGTGGAGTCGGAGCTGCTGTGCACCCGCCTGCTGATGGGCGGCGGCGCCTACAAGTGCATCAAGTGCAGCAAGGTGTTCTCCACACCGCACGGGCTCGAGGTGCACGTGCGCAGGTCCCACAGCGGCACGAGACCCTTTGCGTGCGAGATATGCGGCAAGACCTTCGGGCACGCGGTGAGCCTGGAGCAGCACAAAGCCGTGCACTCGCAGGAACGGAGCTTTGACTGTAAGATCTGTGGCAAGAGCTTCAAGAGGTCATCTACACTGTCCACACACCTGCTCATCCACTCAGACACCCGGCCCTACCCCTGTCAGTACTGTGGCAAGAGGTTCCACCAGAAATCAGACATGAAGAAACACACCTTCATCCACACTGGTGAGAAGCCCCACAAGTGCCAGGTGTGTGGCAAGGCATTCAGCCAGAGCTCCAACCTCATCACCCACAGCCGCAAGCACACAGGCTTCAAGCCCTTCGGCTGCGACCTGTGTGGAAAGGGCTTCCAGAGGAAGGTGGACCTCAGGCGGCACCGGGAGACGCAGCATGGGCTCAAGTGA

Related Sequences

bmy_20450T0 SequenceType object (3)

Length: 528 aa      View alignments
>bmy_20450T0
MPRSFLVKSKKAHSYHQPRSPGPDYSLRLENVLAPGGAGAGRARVGRGRSRGHRLCVPPHHPPGTGKGGPEAPLLPFFVTYLSGSFRACRLGAKASLLPPLDPGGFRPGLGRAEGAQVPRSGGRRFRTIGPIQTQPEPLSCLLSADSTSSTGGAKAEPRGRFSPESQLTEAPDRASTSPGSCEGSVCDRSSESEDFWRPPSPSVSPASEKSVCPSLDEVQPFSLPFKPYSWSGLAGSDLRHLVQSYRPCAALERGAGLGLFCERAPEPGHPAALYGRERAAGGAGAGAPAGGSAGGGAAGGAGLGLYRDFGPAAAGLYERPATGGLYPESGHGLHGDKGTGVKVESELLCTRLLMGGGAYKCIKCSKVFSTPHGLEVHVRRSHSGTRPFACEICGKTFGHAVSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHGLK*