Part of scaffold_2511 (Scaffold)

For more information consult the page for scaffold_2511 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

ITGA11 ENSTTRG00000016031 (Bottlenosed dolphin)

Gene Details

integrin, alpha 11

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000015194, Bottlenosed dolphin)

Protein Percentage 82.01%
cDNA percentage 82.58%
Ka/Ks Ratio 0.26501 (Ka = 0.0481, Ks = 0.1815)

BT.56405 ENSBTAG00000008380 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000011032, Cow)

Protein Percentage 93.56%
cDNA percentage 91.9%
Ka/Ks Ratio 0.09106 (Ka = 0.0327, Ks = 0.3596)

ITGA11  (Minke Whale)

Gene Details

integrin, alpha 11

External Links

Gene match (Identifier: BACU017963, Minke Whale)

Protein Percentage 88.24%
cDNA percentage 90.43%
Ka/Ks Ratio 0.45702 (Ka = 0.0867, Ks = 0.1896)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 2604 bp    Location:192459..65494   Strand:-
>bmy_20492
ATGCTGTTCAGTGTTATTTACTGTGACTCAGAGAGGACACAAGGAGACATGGGACAGTCCTTGTTTTTACACAGTGAAAACCTAGGGTTCACGGACACCTTCAACATGGACATCAAGAAGCCCCGAGTCATCCCCGGCTCCAGAGCCGCCTTCTTTGGCTACACGGTGCAGCAGCATGACATCAGCGGCAAGAAGTGGTTGGTCATCGGCGCTCCACTGGAAACCAACGGCCACCAGAAGACAGGAGACGTGTACAAGTGTCCAGTGACCCAAGGGAACTGCACCAAGCTCAACCTGGGTAACTTGGGCCACTGGTCTCTCCACAAGGAGGCCAGCCATTGTCCAGGCTCAGAGGCTTTCCAGAAGGGTGGAAGGAAAGGGGCCAAGAAGGTGATGATCGTCATCACGGATGGGGAGTCCCACGACAGCCCAGACCTGGAGAAGGTGATCCAGCAAAGCGAGAGGGACAACGTGACCAGATACGCTGTGGCCGTCCTGGGCTACTACAACCGCAGGGGGATCAATCCAGAAGCTTTTCTAAACGAAATCAAATACATCGCCAGTGACCCCGATGACAAGCACTTCTTCAACGTCACTGATGAGGCGGCCCTGAAGGACATTGTCGACGCCCTGGGGGACAGGATCTTCAGCTTGGAAGGCACCAACAAGAATGAAACCTCCTTCGGGCTGGAGATGTCACAGACGGGCTTTTCCTCTCACATAGTGGAGGATGGGATTCTGCTGGGAGCCGTTGGTGCCTATGACTGGAATGGAGCTGTGCTAAAGGAAACCAGCGGCGGGAAGGTCATTCCTCTCCGAGAGTCCTACCTGAAGGAGTTCCCCGAGGAGCTCAAGAACCACGGCGCGTACCTGGGGTACACAGTCACATCGGTGGTGTCCTCCAGGCAGGGGCGGGTGTACGTGGCCGGAGCCCCCCGGTTCAACCACACAGGCAAAGTCATCCTGTTTACTATGCACAACAACCGGAGTCTCACCATCCACCAGGCCCTGCAGGGCGAGCAGATAGGCTCTTACTACGGGAGCGAGATCACCTCGGTGGACGTCGATGGCGACGGTGTGACTGATGTCCTGCTGGTGGGCGCACCCATGTACTTCAGCGAGGGCGGAGAGCGGGGCAGGGTGTACATCTACAACCTGAGACAGAACCGGTTTGTTTACGATGGAACACTGAAGGATTCCCACAGTTACCAGAATGCCCGATTCGGCTCCTCCATCGCCTCGGTTCAGGACCTCAATCAAGATTCCTACAACGATGTGGTGGTGGGAGCCCCTCTGGAGGACAACCACAGAGGAGTCATCTATATCTTCCACGGCTTCCAGGGAAGCATCCTAAAGACACCGAAGCAGAGAATCGCTGCCTCAGAGCTGGCTCCAGGCCTCCAGTATTTTGGCTGCAGCATCCATGGGCAATTGGACCTCGACGAGGATGGGCTTGTGGACCTGGCTGTGGGCGCCCTTGGCAACGCCGTGATTTTGTGGTCCCGCCCTGTGGTTCAGATCAATGCCAGCCTCCACTTTGAGCCGTCCAAGATCAACATCTTTCACAGGGATTGCAAACGCAGCGGYAGAGACGCCACCTGCCTGGCCGCCTTCCTCTGCTTCTCACCCGTCTTCCTGGCACCTCATTACCAAACTTCAACAGTTGGCATCAGGTATAACGCCACCATGGATGAGAGGCGGTACACGCCGAGGGCCCACCTGGATGAGGGCGGGGACCGGTACACCAACAGAGCTGCCCTGCTCTCCTCCAGCCAGGAACACTGTGAGCGGATCAATTTCCATGTCCTGGACACCGCTGACTACGTGAAGCCAGTGACCTTCTCAGTCGAGTATTCCCTGGAGGACCCCGACTATGGCCCCATGCTGGACGACGGCTGGCCCACGACCCTCAGAGTCTCGGTACCCTTCTGGAATGGCTGCAATGAGGATGAGCACTGTGTCCCTGACCTCCTGCTGGACGCCCGCAGTGACCTGCCCACAGCCATGGAGTACTGCCAGAGGGTGCTGAGGAAGCCTGCCCAGGACTGCTCTGCGTACACACTGTCTTTTGACACCACGGTTTTCATCATAGAGAGCACACGGCGGCGGGTGGCGGTGGAGGCCCTGCTGGAGAACAAGGGCGAGAACGCCTACAGCACAGTCCTAAATATTTCACAGTCAGCAAACCTGCAGTTTGCCAGCTTGATCCAGAAGGAAGACAACACGGCCCTCCTGCGCTTGCACCTCAAGTATGAGGCTGACGTGCTCTTCACCAGGAGCAGCAGCCTGAGCCACTACGAGGTCAAGCCCAACAGCTCGCTGGAGAGATACCATGGCATTGGGCCTCCCTTCAACTGCGTTTTCAAGAATCACAGCAACGCTGATGTAGTTTCCATCAACTGCAACGTGAGGCTGGCCCCCAACCAGGAAATCAGTTTCCATCTGCTGGGGAACCTGTGGTTGAGGTCCCTAAAAGCACTCAAGTACAAGTTGATGAGAATCACGGTCCACGCAGCCTTGCAGAGGCAGTTCCACAGCCCTTTCATCTTCCGCGAGGAGGATCCCAGCCGCCAGTTTATATCTGATGTTGCTGCATCATTATAA

Related Sequences

bmy_20492T0 Protein

Length: 868 aa      View alignments
>bmy_20492T0
MLFSVIYCDSERTQGDMGQSLFLHSENLGFTDTFNMDIKKPRVIPGSRAAFFGYTVQQHDISGKKWLVIGAPLETNGHQKTGDVYKCPVTQGNCTKLNLGNLGHWSLHKEASHCPGSEAFQKGGRKGAKKVMIVITDGESHDSPDLEKVIQQSERDNVTRYAVAVLGYYNRRGINPEAFLNEIKYIASDPDDKHFFNVTDEAALKDIVDALGDRIFSLEGTNKNETSFGLEMSQTGFSSHIVEDGILLGAVGAYDWNGAVLKETSGGKVIPLRESYLKEFPEELKNHGAYLGYTVTSVVSSRQGRVYVAGAPRFNHTGKVILFTMHNNRSLTIHQALQGEQIGSYYGSEITSVDVDGDGVTDVLLVGAPMYFSEGGERGRVYIYNLRQNRFVYDGTLKDSHSYQNARFGSSIASVQDLNQDSYNDVVVGAPLEDNHRGVIYIFHGFQGSILKTPKQRIAASELAPGLQYFGCSIHGQLDLDEDGLVDLAVGALGNAVILWSRPVVQINASLHFEPSKINIFHRDCKRSGRDATCLAAFLCFSPVFLAPHYQTSTVGIRYNATMDERRYTPRAHLDEGGDRYTNRAALLSSSQEHCERINFHVLDTADYVKPVTFSVEYSLEDPDYGPMLDDGWPTTLRVSVPFWNGCNEDEHCVPDLLLDARSDLPTAMEYCQRVLRKPAQDCSAYTLSFDTTVFIIESTRRRVAVEALLENKGENAYSTVLNISQSANLQFASLIQKEDNTALLRLHLKYEADVLFTRSSSLSHYEVKPNSSLERYHGIGPPFNCVFKNHSNADVVSINCNVRLAPNQEISFHLLGNLWLRSLKALKYKLMRITVHAALQRQFHSPFIFREEDPSRQFISDVAASL*