Sequence detailsbmy_20496 (Coding sequence)

Part of scaffold_2520 (SequenceType object (1))

For more information consult the page for scaffold_2520 (SequenceType object (1))

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

OTOP1ENSTTRG00000007466 (Bottlenosed dolphin)

Gene Details

otopetrin 1

External Links

Gene match(Ensembl Protein ID:ENSTTRP00000007063, Bottlenosed dolphin)

Protein Percentage 86.67%
cDNA percentage 88.3%
Ka/Ks Ratio 0.53757 (Ka = 0.0172, Ks = 0.032)

OTOP1ENSBTAG00000003651 (Cow)

Gene Details

otopetrin-1

External Links

Gene match(Ensembl Protein ID:ENSBTAP00000004759, Cow)

Protein Percentage 86.0%
cDNA percentage 87.89%
Ka/Ks Ratio 0.32859 (Ka = 0.0924, Ks = 0.2813)

Additional orthologs identified in other species via the OPTIC pipeline.

OTOP1 (Human)   Otop1 (Mouse)  

Genome Location

Sequence SequenceType object (2)

Length: 1437 bp    Location:153405..180879   Strand:+
Raw sequence 
>bmy_20496
ATGCTGCTGCAGCTGCTCTGGATGCTGTGGTACGTGGGCCGCAGCTCCGCGCACCGCCGCCCCAGCCGCCTCAAGGACACGCACGCCGGCGCGCGCTGGCTCCGCGGTAGTATCACATTGTTTGCAGTCATTACCATCATCCTGGGATGCCTTAAAATTGGGTACTTCGCTGGATTTTCTGAATGTTTATCAKCCACAGAAGGAGTTTTCCCTGTTACCCATGCGGTACATACTCTGTTGCAGGTGTACTTTCTTTGGGGGCACGCAAAGGATATCATCCAATCTTTCAAAACACTGGAAAGGTTTGGGGTGATCCACTCAGTGTTCACCAACCTGCTTCTTTGGGTGAACAGCGTCCTGAATGAGTCAAAGCACCAGCTTAACGAGCACAAGGAGAGGCTCATCACCCTGGGCTTCGGGAACATAACAATAGTCTTAGATGACCACACGCCTCCGTGTAACTGCACACCCCCGACCCTCTGCTCTGCCATCTCCCACGGGATCTACTACCTCTACCCTTTCAACATAGAATATCAGATACTGGCCTCCACGATGCTCTACGTCCTGTGGAAAAACATCGGGCGCAAAGTTGACAGTCATCAGCATCAGAAGATGCAGTTCAGGTCTCACGGGGTCATGCTGGGCTCGGTACTGGGCCTGACCGCACTGGCTGCCACCATTGGGGTCGTGGTGGTGTATCTGATTTGGATCGGGCGTTCCAAAACCAGGAGCGAGTCAGCACTCATCATGTTCTACCTGTATGCCATCATCTTGCTCATGCTCATGGGGGCGGCAGGGCTGGCTGGGATCCGGATTTATAGGCTAGATGAGCAATCACTAGATGAGTCCAAAAATCCGGCCCGCAAACTGGACGCGGACCTGTTGGTGGGCACTGCCTCCGGCTCCTGGCTCATCTCCTGGGGCTCCATCCTGGCCATCCTCTGTGCCGAGTCCCGCCCCCCGTACACCTGGTACAACCTGCCCTACTCCATCCTGGTGGTTGTTGAGAAATACATCCAGAACCTCTTCATCATTGAGTCCATTCACCGAGAGCCGGAGAAGCTCTCCAAGGATATCAGAACCCTGCAGGTGGTCACAGTCTGCAATGGCAATGCCACATCCCTCCCTTCTTCTTGCTTTGAGAGCAGACCTGCAGCCGGGGACGTGGCTCCCCAGGGCAGCGAGATGCCACATGCGGCCAATGGAAATATGTGTCTGAGAGAAGTTGGTAGCAAAGAGGAAGAGGAGAAGAGCTGGGAAGGGGCCCTGGGCCCAGCCTGCCACCCCCATTTCCTGCAGGGCAATGCCCAGAGAAGAGTCTTAAGGAATATTGCAGCCTTTTTGTTCCTCTGCAATATTTCGGTAATCTGCAAGTTATTTCTTTATTTAAAAATATTGATTAATCTATTTTCCTTGCCGTTTTCAAATAAGGAATGA

Related Sequences

bmy_20496T0 SequenceType object (3)

Length: 479 aa      View alignments
>bmy_20496T0
MLLQLLWMLWYVGRSSAHRRPSRLKDTHAGARWLRGSITLFAVITIILGCLKIGYFAGFSECLSXTEGVFPVTHAVHTLLQVYFLWGHAKDIIQSFKTLERFGVIHSVFTNLLLWVNSVLNESKHQLNEHKERLITLGFGNITIVLDDHTPPCNCTPPTLCSAISHGIYYLYPFNIEYQILASTMLYVLWKNIGRKVDSHQHQKMQFRSHGVMLGSVLGLTALAATIGVVVVYLIWIGRSKTRSESALIMFYLYAIILLMLMGAAGLAGIRIYRLDEQSLDESKNPARKLDADLLVGTASGSWLISWGSILAILCAESRPPYTWYNLPYSILVVVEKYIQNLFIIESIHREPEKLSKDIRTLQVVTVCNGNATSLPSSCFESRPAAGDVAPQGSEMPHAANGNMCLREVGSKEEEEKSWEGALGPACHPHFLQGNAQRRVLRNIAAFLFLCNISVICKLFLYLKILINLFSLPFSNKE*