Part of scaffold_2540 (Scaffold)

For more information consult the page for scaffold_2540 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

HSPA13 ENSTTRG00000007412 (Bottlenosed dolphin)

Gene Details

heat shock protein 70kDa family, member 13

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007013, Bottlenosed dolphin)

Protein Percentage 99.28%
cDNA percentage 98.49%
Ka/Ks Ratio 0.06835 (Ka = 0.0033, Ks = 0.049)

HSPA13 ENSBTAG00000012908 (Cow)

Gene Details

Heat shock 70 kDa protein 13

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000017155, Cow)

Protein Percentage 92.99%
cDNA percentage 92.68%
Ka/Ks Ratio 0.18976 (Ka = 0.0378, Ks = 0.1991)

HSPA13  (Minke Whale)

Gene Details

heat shock protein 70kDa family, member 13

External Links

Gene match (Identifier: BACU000080, Minke Whale)

Protein Percentage 97.55%
cDNA percentage 97.79%
Ka/Ks Ratio 0.48786 (Ka = 0.018, Ks = 0.0369)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1329 bp    Location:78194..88040   Strand:+
>bmy_20504
ATGCTGGATTTTGAGAGAGCCAGATACCTCTTTGATGTACAGTCCAGTGTTCTTTCCACCAATCCGGGATCAGCCGTTCTGACTCTCCTGTTGGCTGGCTATTTCGCGCAACAGTATTTACCACTGCCTACTCCTAAGGTGATTGGAATTGACCTTGGCACTACCTACTGTTCAGTTGGGGTGTTTTTTCCTGGAACAGGAAAAGTAAAGGTCATTCCAGATGAAAATGGGCACGTCAGCCTACCCAGCATGGTGTCCTTTACTGACAACGATGTGTATGTTTTAAACAAAAATGGAATGGTTGAGTTTTCTGTGACAAGTAATGAGACCATCACCGTTTCCCCAGAATATGTTGGCTCTAGACTGTTGCTGAAATTAAAGGAAATGGCAGAGGAATATCTTGGAATGCCAGTTGCCAATGCTGTTATTTCTGTACCAGCAGAATTTGATCTAAAACAGAGAAATTCAACAATTCAAGCTGCTAACCTTGCAGGACTGAAGATCTTAAGAGTAATAAATGAACCCACAGCAGCAGCTATGGCCTATGGTCTCCACAAAGCTGATGTCTTTCACGTCTTGGTGATAGATTTGGGCGGAGGAACTCTAGATGTGTCATTGCTGAATAAACAAGGAGGAATGTTTTTAACCCGAGCGATGTCTGGAAACAATAAACTTGGAGGACAAGACTTCAATCAAAGATTGCTTCAGTACTTATATAAACAGATCTATCAAACATATGGCTTCCTACCCTCTAGGAAAGAGGAAATCCACAGATTAAGACAAGCTGTAGAAATGGTCAAATTAAACCTGACTCTTCATCAGACTGCCCAGATGTCAGTATTACTAACGGTGGAGGAAAAGGACGGGAAGGAACCTCAGAGTAGTGACACTGAACCGCCAAAGGACGAACTTTCCCCGGCAGACAGCCCCCATGTGAACAGCATGTTTGGAGCTAGCCTTCCTGAAAAGAAGAATGGAGAAAGTCAGGTTTTATTTGAAACAGAAATATCACGGAAGCTCTTTGACACCCTTAATGAAGATCTTTTCCAGAAAATACTCGTACCCATTCAGCAAGTGTTAAAAGAAGGCCACCTGGAAAAAACTGAGATTGATGAGGTGGTTTTGGTTGGGGGCTCAACTCGTATTCCTCGAATCCGCCAAGTCATTCAAGAGTTCTTTGGAAAGGATCCCAACACGTCTGTAGACCCTGACTTGGCAGTGGTGACAGGAGTGGCTATCCAAGCAGGGATTGATGGAGGCTCTTGGCCTCTCCAGGTCAGTGCGTTAGAAATTCCCAGTAAGCATTTACAAAAGACCAACTTCAACTGA

Related Sequences

bmy_20504T0 Protein

Length: 443 aa      View alignments
>bmy_20504T0
MLDFERARYLFDVQSSVLSTNPGSAVLTLLLAGYFAQQYLPLPTPKVIGIDLGTTYCSVGVFFPGTGKVKVIPDENGHVSLPSMVSFTDNDVYVLNKNGMVEFSVTSNETITVSPEYVGSRLLLKLKEMAEEYLGMPVANAVISVPAEFDLKQRNSTIQAANLAGLKILRVINEPTAAAMAYGLHKADVFHVLVIDLGGGTLDVSLLNKQGGMFLTRAMSGNNKLGGQDFNQRLLQYLYKQIYQTYGFLPSRKEEIHRLRQAVEMVKLNLTLHQTAQMSVLLTVEEKDGKEPQSSDTEPPKDELSPADSPHVNSMFGASLPEKKNGESQVLFETEISRKLFDTLNEDLFQKILVPIQQVLKEGHLEKTEIDEVVLVGGSTRIPRIRQVIQEFFGKDPNTSVDPDLAVVTGVAIQAGIDGGSWPLQVSALEIPSKHLQKTNFN*