Part of scaffold_2548 (Scaffold)

For more information consult the page for scaffold_2548 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

VPS26A ENSTTRG00000008175 (Bottlenosed dolphin)

Gene Details

vacuolar protein sorting 26 homolog A (S. pombe)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000007738, Bottlenosed dolphin)

Protein Percentage 87.88%
cDNA percentage 91.05%
Ka/Ks Ratio 0.42782 (Ka = 0.0732, Ks = 0.1711)

VPS26A ENSBTAG00000016882 (Cow)

Gene Details

Vacuolar protein sorting-associated protein 26A

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000022455, Cow)

Protein Percentage 88.74%
cDNA percentage 90.62%
Ka/Ks Ratio 0.3018 (Ka = 0.067, Ks = 0.222)

VPS26A  (Minke Whale)

Gene Details

vacuolar protein sorting 26 homolog A (S. pombe)

External Links

Gene match (Identifier: BACU000736, Minke Whale)

Protein Percentage 94.09%
cDNA percentage 95.57%
Ka/Ks Ratio 0.49024 (Ka = 0.0328, Ks = 0.067)

Genome Location

Sequence Coding sequence

Length: 885 bp    Location:47056..202721   Strand:+
>bmy_20511
ATGCGGCAGCCTSTTYAGGCCCCACTTGTTCTAAGAAGACGTTTCTTTGGAACCATGAAGAGAGGAGCCATTTATCTCAGAGTGACAGCTCCTGGCCCAGATTCCAGGCAGAAGCTGCCTTCAAGCCAAAGCATCGATCCGAGCCTAGGAAGGAATCGATGTGGGTATTTGGAAATGAAGAACGGCCGGGAGCAGAGGTATTCAGCTTTGGCACACAGCAGTGTGCGTATCGATGTTGTCCTTAATGATGGGGAAACCAGGAAAATGGTGGAAATGAAAACTGAAGTTGGCAAAGTAGAAAAACGCTATCTTTTCTACGAYGGAGAATCTGTTTCAGGAAAGGTAAACCTAGCCTTTCAGCAACCTGGAAAGAGGCTAGAGCACCAAGGAATCGGAATTGAATTTGTAGGTCAAATTGAACTTTTCAATGACAAGAGTAATACTCACGAATTTGTAAACCTAATGAAAGAACTAGCCTTACCTGGAGAACTGACTCAGAGCAGAAGTTATGATTTTGCATTTATGCAAGTTGAAAAGCCATGCGAATCTTATATCGGTGCCAATGTCTGCCTAAGGTATTTCCTTAAAGTGACAATAGTAAGAAGACTGACAGACTTGGTAAAAGAATATGAYCTTATTGYTCACCAGCTTGCTACCTATCCTGATGTCAACAATTCTATTAAGATGGAAGTGGGCACTGAAGATTGTCTACACATAGAATTTGAATATAATAAATCAAAGTATCATTTAAAGGATGTGACTGTGGGAAAAATTTACTTCTTATTAGTAAGAATAAAAATCCAACATATGGAGTTACAACTGATTAAAAAAGAGATCACGGGAATTGGACCCAGTGCCACAACAGAAAACAGAAACGATCGCTAA

Related Sequences

bmy_20511T0 Protein

Length: 295 aa      View alignments
>bmy_20511T0
MRQPXXAPLVLRRRFFGTMKRGAIYLRVTAPGPDSRQKLPSSQSIDPSLGRNRCGYLEMKNGREQRYSALAHSSVRIDVVLNDGETRKMVEMKTEVGKVEKRYLFYDGESVSGKVNLAFQQPGKRLEHQGIGIEFVGQIELFNDKSNTHEFVNLMKELALPGELTQSRSYDFAFMQVEKPCESYIGANVCLRYFLKVTIVRRLTDLVKEYDLIXHQLATYPDVNNSIKMEVGTEDCLHIEFEYNKSKYHLKDVTVGKIYFLLVRIKIQHMELQLIKKEITGIGPSATTENRNDR*