Part of scaffold_2524 (Scaffold)

For more information consult the page for scaffold_2524 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PGBD5 ENSTTRG00000015307 (Bottlenosed dolphin)

Gene Details

piggyBac transposable element derived 5

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000014506, Bottlenosed dolphin)

Protein Percentage 91.26%
cDNA percentage 90.44%
Ka/Ks Ratio 0.04249 (Ka = 0.0114, Ks = 0.2679)

PGBD5 ENSBTAG00000027205 (Cow)

Gene Details

Uncharacterized protein

External Links

Gene match (Ensembl Protein ID: ENSBTAP00000038812, Cow)

Protein Percentage 91.96%
cDNA percentage 90.91%
Ka/Ks Ratio 0.07495 (Ka = 0.0481, Ks = 0.6423)

PGBD5  (Minke Whale)

Gene Details

piggyBac transposable element derived 5

External Links

Gene match (Identifier: BACU005030, Minke Whale)

Protein Percentage 93.36%
cDNA percentage 94.06%
Ka/Ks Ratio 0.13839 (Ka = 0.0414, Ks = 0.299)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 861 bp    Location:138046..180713   Strand:+
>bmy_20513
ATGCCGCCCAGCGCCAGTGCCGTGGACTTCTTCCAGCTCTTCGTCCCTGACAACGTCCTCAAGAACATGGTGGTGCAGACCAACCTGTACGCCAAGAAGTTCCAGGAGCGGTTCGGGAGCGACGGGGCCTGGGTGGACGTGACGCTGCCGGAGATGAAGGCGTTCCTGGGCTACGTGATCTCCACCAGCACCTCCCACTGCGAGTCGGTGCTCAGCATCTGGAGCGGCGGCTTCTACAGCAACCGCAGCCTCGCCCTGGTCATGAGCCAGGCCCGCTTCGAGAAGATCCTCAAGTACTTCCACGTCGTGGCCTTCCGCTCCAGCCAGACCACGCACGGCCTCTACAAGGTCCAGCCCTTCCTGGACTCCCTGCAGAATGGCTTCGACTCCGCCTTCAGGCCTTCCCAAACCCAGATTTACGTCCACCTGAAGGAAGGCGGGGGCCCTGACGGGCTGGACGCGCTGAAGAACAAGCCGCAGCTGCACAGCACGGTGGCCAGGAGCCTGTGCCGGACCGCGGCCGGGAAGAACTACATCATCTTCACCGGGCCCAGCATCACCAGCCTGACCCTGTTTGAGGAGTTTGAAAAGCAAGGGATCTACTGCTGTGGGCTGCTCAGCTCCAGGAAGAGTGACTGCACCGGCCTGCCGCCCTCCATGCTGAGCAGCCCGGCCTTGCCGCCCGCCCGGGGCCAGCACAGCATCCGGATGAAGGGGAGCATGTCCCTCATCTGCTGGTACAACAAGGGGCACTTCCGCTTCCTGACCAACGCCTACTCGCCCGTGCAGCAAGGCGAATCAAAAGATTTTGAGAACCGAAAAGAAGAATTAAACTTCTTTTCAACCGAAAAGAAGAATTAA

Related Sequences

bmy_20513T0 Protein

Length: 287 aa      View alignments
>bmy_20513T0
MPPSASAVDFFQLFVPDNVLKNMVVQTNLYAKKFQERFGSDGAWVDVTLPEMKAFLGYVISTSTSHCESVLSIWSGGFYSNRSLALVMSQARFEKILKYFHVVAFRSSQTTHGLYKVQPFLDSLQNGFDSAFRPSQTQIYVHLKEGGGPDGLDALKNKPQLHSTVARSLCRTAAGKNYIIFTGPSITSLTLFEEFEKQGIYCCGLLSSRKSDCTGLPPSMLSSPALPPARGQHSIRMKGSMSLICWYNKGHFRFLTNAYSPVQQGESKDFENRKEELNFFSTEKKN*