Part of scaffold_2527 (Scaffold)

For more information consult the page for scaffold_2527 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible orthologs in this organism.

PRPF39 ENSTTRG00000006653 (Bottlenosed dolphin)

Gene Details

PRP39 pre-mRNA processing factor 39 homolog (S. cerevisiae)

External Links

Gene match (Ensembl Protein ID: ENSTTRP00000006298, Bottlenosed dolphin)

Protein Percentage 79.93%
cDNA percentage 80.78%
Ka/Ks Ratio 0.31043 (Ka = 0.0304, Ks = 0.0981)

PRPF39  (Minke Whale)

Gene Details

pre-mRNA processing factor 39

External Links

Gene match (Identifier: BACU009360, Minke Whale)

Protein Percentage 95.6%
cDNA percentage 96.75%
Ka/Ks Ratio 0.40781 (Ka = 0.0274, Ks = 0.0672)

Additional orthologs identified in other species via the OPTIC pipeline.

Genome Location

Sequence Coding sequence

Length: 1647 bp    Location:78241..99223   Strand:+
>bmy_20526
ATGCAGGGACTGCTGCGCTTTGAAGATCAAGACTCTGCACGTGGGGATCAGAACATTGCCATGTTCTATCCAACCTCCACCCAAATGGTGTATCGCCGGGGGCTTCAGGCAATACCTCTTAGTGTTGACCTTTGGATACATTATATAAACTTCTTAAAAGAAACATTGGACCCTGGTGATCCTGAGACAAACAGTACAATAAGAGGAACTTTTGAGCATGCTGTTCTAGCTGCAGGAACAGATTTCCGATCTGACAGACTCTGGGAAATGTATATAAACTGGGAAAATGAACAGGGAAACCTGAGAGAAGTTACAGCTATATATGATCGTATTCTTGGTATTCCAACACAGCTGTATAGTCATCATTTTCAGAGATTTAAAGAACATATACAGAATAACCTACCTAGAGATCTTCTAACTGGTGAACAGTTTATTCAGCTGCGAAGGGAATTAGCTTCTGTAAATGGGCATAGTGGTGATGATGGTCCTCCTGGTGATGATCTACCGTCAGGAATTGAAGACATAACTGATCCAGCAAAGCTAATTACTGAAATAGAAAACATGAGACATAGAATCATTGAAATTCATCAAGAAATGTTTAATTATAATGAACATGAAGTTAGTAAAAGGTGGACATTTGAAGAAGGTATTAAAAGACCTTATTTTCATGTGAAACCATTGGAAAAGGCACAACTGAAAAACTGGAAAGAATACTTAGAATTTGAAATTGAAAATGGGACTCATGAACGAGTTGTGGTTCTCTTTGAAAGATGTGTCATATCATGTGCCCTCTATGAGGAGTTTTGGATTAAGTATGCCAAGTATATGGAAAATCATAGCATTGAAGGAGTGAGGCATGTCTTCAGCAGAGCTTGCACAATTCATCTCCCAAAGAAACCCATGGTGCATATGCTTTGGGCAGCTTTTGAGGAACAGCAGGGTAATATTAATGAAGCCAGGAATATCTTGAGAACATTTGAAGAATGTGTTCTAGGATTGGCAATGGTTCGTTTGAGAAGAGTAAGTTTAGAACGACGGCTTGGAAATATGGAAGAAGCTGAACGTTTGCTTCAGGAAGCCATTAAAAATGCCAAATCAAATAATGAATCATCATTTTATGCTATCAAACTAGCCCGGCATCTTTTCAAAATACAAAAAAACCTTCCAAAATCAAGAAAGGTGCTTTTGGAAGCTATTGAAAGAGACAAAGAGAACACAAAGTTATACCTCAATTTACTTGAAATGGAATATAGTGGTGACCTCAAACAAAATGAAGAAAATATCCTAAATTGTTTTGACAAAGCTATACATGGTTCATTACCTATGAAAATGAGAATTACATTTTCTCAGAGAAAAGTGGAATTTCTTGAAGATTTTGGTTCAGATGTTGATAAGCTTCTGAATGCTTATGATGAACATCAAACACTCCTAAAAGAACAGGATTCTTTAAAAAGGAAAGCAGAAAATGGATCAGAAGAACCAGAGGAAAAGAAAGCACACACAGAAGATACAACTTCATCATCTACACAGATGATTGATGGTGATTTACAGGCAAATCAAGCTGCATATAATTATAGTGCCTGGTATCAATACAATTATCAGAATCCTTGGAATTATGGACAGTATTATCCTCCCCCTCCAACCTGA

Related Sequences

bmy_20526T0 Protein

Length: 549 aa     
>bmy_20526T0
MQGLLRFEDQDSARGDQNIAMFYPTSTQMVYRRGLQAIPLSVDLWIHYINFLKETLDPGDPETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSHHFQRFKEHIQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKLITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEFEIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPMVHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRLGNMEEAERLLQEAIKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDLKQNEENILNCFDKAIHGSLPMKMRITFSQRKVEFLEDFGSDVDKLLNAYDEHQTLLKEQDSLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQYYPPPPT*